RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ANXA4P09525 319 aaPredicted RBP14.39□□□□□ -0.11
SKA2-209ENST00000583976 RFPL3SP0C7P2 107 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 NR2F6P10588 404 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 ALDH9A1P49189 494 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 WNT3P56703 355 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 OCRLQ01968 901 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 SERTAD2Q14140 314 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 NOXRED1Q6NXP6 359 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 RGS9BPQ6ZS82 235 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 RNF165Q6ZSG1 346 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 WDR53Q7Z5U6 358 aaPredicted RBP14.39□□□□□ -0.11
SKA2-209ENST00000583976 HOMEZQ8IX15 550 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 ZZZ3Q8IYH5 903 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 OR8K3Q8NH51 312 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 PPWD1Q96BP3 646 aaKnown RBP14.39□□□□□ -0.11
SKA2-209ENST00000583976 GAL3ST4Q96RP7 486 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 LIME1Q9H400 295 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 WDR41Q9HAD4 459 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 SH2D2AQ9NP31 389 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 COPS7AQ9UBW8 275 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 HAO1Q9UJM8 370 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 KIAA1549Q9HCM3 1950 aa14.39□□□□□ -0.11
SKA2-209ENST00000583976 PRRC2AP48634 2157 aaKnown RBP14.39□□□□□ -0.11
SKA2-209ENST00000583976 KLF11O14901 512 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 GUCY1B2O75343 617 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 IGKV3-11P04433 115 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 IL3P08700 152 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 CD1EP15812 388 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 STT3AP46977 705 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 ZFP36L2P47974 494 aaKnown RBP14.38□□□□□ -0.11
SKA2-209ENST00000583976 MAN2A2P49641 1150 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 IST1P53990 364 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 RPL38P63173 70 aaKnown RBP14.38□□□□□ -0.11
SKA2-209ENST00000583976 IGLV3-21P80748 117 aaPredicted RBP14.38□□□□□ -0.11
SKA2-209ENST00000583976 FOLH1Q04609 750 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 KIAA0040Q15053 153 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 HYAL4Q2M3T9 481 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 ZNF791Q3KP31 576 aaPredicted RBP14.38□□□□□ -0.11
SKA2-209ENST00000583976 RFTN2Q52LD8 501 aaPredicted RBP14.38□□□□□ -0.11
SKA2-209ENST00000583976 XKR7Q5GH72 579 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 OPN5Q6U736 354 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 RELL2Q8NC24 303 aaPredicted RBP14.38□□□□□ -0.11
SKA2-209ENST00000583976 OR10G3Q8NGC4 313 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 C16orf78Q8WTQ4 265 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 CKAP2Q8WWK9 683 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 TANKQ92844 425 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 TUBGCP3Q96CW5 907 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 C11orf24Q96F05 449 aaPredicted RBP14.38□□□□□ -0.11
SKA2-209ENST00000583976 SGCZQ96LD1 299 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 DGAT2Q96PD7 388 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 NUF2Q9BZD4 464 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 LDAHQ9H6V9 325 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 EXO5Q9H790 373 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 PROK2Q9HC23 129 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 SLCO1B3Q9NPD5 702 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 PFDN4Q9NQP4 134 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 ALKBH4Q9NXW9 302 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 ACAD8Q9UKU7 415 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 DLGAP4Q9Y2H0 992 aa14.38□□□□□ -0.11
SKA2-209ENST00000583976 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.38□□□□□ -0.11
SKA2-209ENST00000583976 EXPH5Q8NEV8 1989 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 MAP1AP78559 2803 aaPredicted RBP14.37□□□□□ -0.11
SKA2-209ENST00000583976 TRGV5A0A0B4J1U4 118 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 A0A1W2PS29 197 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 SYNDIG1LA6NDD5 238 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 PRPH2P23942 346 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 TRA2BP62995 288 aaKnown RBP14.37□□□□□ -0.11
SKA2-209ENST00000583976 ERVK-8P63133 956 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 KCNJ2P63252 427 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 ATP6AP1LQ52LC2 224 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 GALNT18Q6P9A2 607 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 SEM1Q6ZVN7 128 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 KIRREL3Q8IZU9 778 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 NAXEQ8NCW5 288 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 FAM13CQ8NE31 585 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 OR5L2Q8NGL0 311 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 NUBPLQ8TB37 319 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 SPACA9Q96E40 222 aaPredicted RBP14.37□□□□□ -0.11
SKA2-209ENST00000583976 PPP3R2Q96LZ3 170 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 MAGEB18Q96M61 343 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 CCT7Q99832 543 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 GPATCH1Q9BRR8 931 aaKnown RBP14.37□□□□□ -0.11
SKA2-209ENST00000583976 FAIM2Q9BWQ8 316 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 SIRT5Q9NXA8 310 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 ERVK-19Q9WJR5 959 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 PCDHA9Q9Y5H5 950 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 ACANP16112 2415 aa14.37□□□□□ -0.11
SKA2-209ENST00000583976 C1orf226A1L170 272 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 NPIPB8E9PQR5 432 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 WDR1O75083 606 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 ERAL1O75616 437 aaKnown RBP14.36□□□□□ -0.11
SKA2-209ENST00000583976 CLPSP04118 112 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 COX7A2P14406 83 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 TACR1P25103 407 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 TRPC1P48995 793 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 PLIN5Q00G26 463 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 C2orf80Q0P641 193 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 MPEG1Q2M385 716 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 PIGGQ5H8A4 983 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 C6orf136Q5SQH8 315 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms