RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 BRF2Q9HAW0 419 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ZBTB26Q9HCK0 441 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 RASSF1Q9NS23 344 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 CCM2LQ9NUG4 571 aaPredicted RBP7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ZNF358Q9NW07 568 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ZNF446Q9NWS9 450 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 MAT2BQ9NZL9 334 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 PRODH2Q9UF12 536 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 TRPS1Q9UHF7 1281 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 PSME2Q9UL46 239 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 MAPRE3Q9UPY8 281 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 DTX4Q9Y2E6 619 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 PLLPQ9Y342 182 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 PCDHA9Q9Y5H5 950 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ZNF407Q9C0G0 2248 aa7.96□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ANKRD17O75179 2603 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 MBD3L4A6NDZ8 208 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 MBD3L3A6NE82 208 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 PRAMEF25A6NGN4 478 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 TUBAL3A6NHL2 446 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 MBD3L5A6NJ08 208 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 CD8B2A6NJW9 211 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 A6NNC1 897 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 A8MT66 165 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 SYT5O00445 386 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 SPAG7O75391 227 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ERN1O75460 977 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 SASH3O75995 380 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 PDYNP01213 254 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 TMIGD3P0DMS9 266 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 CYP4B1P13584 511 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 CD99P14209 185 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 NAGAP17050 411 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 BMP7P18075 431 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 TAC1P20366 129 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 HMOX2P30519 316 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 CEACAM8P31997 349 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 CRHR1P34998 444 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 OPRM1P35372 400 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 FEN1P39748 380 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 CPA2P48052 419 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ZNF136P52737 540 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 MAGOHP61326 146 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 DCAF7P61962 342 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 SORDQ00796 357 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 SLC18A2Q05940 514 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 CSTF3Q12996 717 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 EXOSC7Q15024 291 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 FBXL19-AS1Q494R0 122 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 CCDC153Q494R4 210 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 EIPR1Q53HC9 387 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 NHSL2Q5HYW2 709 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 DCST1Q5T197 706 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 FNDC7Q5VTL7 733 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 TIGD3Q6B0B8 471 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 VASNQ6EMK4 673 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 SLC30A6Q6NXT4 461 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 LETMD1Q6P1Q0 360 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 TMEM81Q6P7N7 255 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ENPP6Q6UWR7 440 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 YRDCQ86U90 279 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 EXOC3L1Q86VI1 746 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 IFNEQ86WN2 208 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 C1orf52Q8N6N3 182 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 CCDC63Q8NA47 563 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 OR52R1Q8NGF1 315 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 OR14L1PQ8NHC6 308 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 MBD3L2Q8NHZ7 208 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ZNF483Q8TF39 744 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 MZB1Q8WU39 189 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ABTB1Q969K4 478 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 TMCO6Q96DC7 493 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ATP6V1G3Q96LB4 118 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 MRPL57Q9BQC6 102 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 YIPF4Q9BSR8 244 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 FARSBQ9NSD9 589 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 GIMAP4Q9NUV9 329 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 EHD3Q9NZN3 535 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 UTS2RQ9UKP6 389 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 CBLCQ9ULV8 474 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 PLEKHA6Q9Y2H5 1048 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ACTL7BQ9Y614 415 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 PCNX1Q96RV3 2341 aa7.95□□□□□ -1.14
CDK5RAP3-229ENST00000583697 GNG14A0A1W2PPG7 69 aa7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 FAM221AA4D161 298 aa7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 FRG2CA6NGY1 282 aa7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 HMGB1P1B2RPK0 211 aaPredicted RBP7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 KDM4EB2RXH2 506 aaPredicted RBP7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 PCDH7O60245 1069 aa7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ABCB7O75027 752 aa7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 GLRA3O75311 464 aa7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 BCAS2O75934 225 aaPredicted RBP7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 SUPT7LO94864 414 aa7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 OR4F21O95013 312 aa7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 GOSR1O95249 250 aa7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 KRT6AP02538 564 aa7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 KRT6BP04259 564 aa7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 ABCB1P08183 1280 aaPredicted RBP7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 HSD3B1P14060 373 aa7.94□□□□□ -1.14
CDK5RAP3-229ENST00000583697 TSPAN8P19075 237 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms