RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 PRIM2P49643 509 aa18.52■□□□□ 0.56
TOP3A-213ENST00000582230 TMED10P49755 219 aaKnown RBP18.52■□□□□ 0.56
TOP3A-213ENST00000582230 KLRB1Q12918 225 aa18.52■□□□□ 0.56
TOP3A-213ENST00000582230 OR1C1Q15619 314 aa18.52■□□□□ 0.56
TOP3A-213ENST00000582230 CT45A2Q5DJT8 189 aa18.52■□□□□ 0.56
TOP3A-213ENST00000582230 ZNF468Q5VIY5 522 aaPredicted RBP18.52■□□□□ 0.56
TOP3A-213ENST00000582230 TSPEARQ8WU66 669 aa18.52■□□□□ 0.56
TOP3A-213ENST00000582230 GIMAP5Q96F15 307 aa18.52■□□□□ 0.56
TOP3A-213ENST00000582230 LMF2Q9BU23 707 aaKnown RBP18.52■□□□□ 0.56
TOP3A-213ENST00000582230 TRIM4Q9C037 500 aa18.52■□□□□ 0.56
TOP3A-213ENST00000582230 EQTNQ9NQ60 294 aa18.52■□□□□ 0.56
TOP3A-213ENST00000582230 SAR1AQ9NR31 198 aa18.52■□□□□ 0.56
TOP3A-213ENST00000582230 VPS4AQ9UN37 437 aa18.52■□□□□ 0.56
TOP3A-213ENST00000582230 ERVK-11Q9UQG0 969 aa18.52■□□□□ 0.56
TOP3A-213ENST00000582230 NPFFR2Q9Y5X5 522 aa18.52■□□□□ 0.56
TOP3A-213ENST00000582230 CROCCQ5TZA2 2017 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 RFXANKO14593 260 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 SHOX2O60902 331 aaPredicted RBP18.51■□□□□ 0.55
TOP3A-213ENST00000582230 OR6B1O95007 311 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 KRT16P08779 473 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 FBXO45P0C2W1 286 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 TRPC1P48995 793 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 PSG6Q00889 435 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 TP53BP2Q13625 1128 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 CYP27C1Q4G0S4 372 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 MFSD12Q6NUT3 480 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 LYPD8Q6UX82 237 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 IL20RBQ6UXL0 311 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 PIGWQ7Z7B1 504 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 SLC44A2Q8IWA5 706 aaPredicted RBP18.51■□□□□ 0.55
TOP3A-213ENST00000582230 CYP4Z2PQ8N1L4 340 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 CATSPER1Q8NEC5 780 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 HOXB13Q92826 284 aaPredicted RBP18.51■□□□□ 0.55
TOP3A-213ENST00000582230 PNPLA2Q96AD5 504 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 TMEM125Q96AQ2 219 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 SGCZQ96LD1 299 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 INPP5KQ9BT40 448 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 Q9N2J8 555 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 SLC52A3Q9NQ40 469 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 SERHLQ9NQF3 203 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 FAF1Q9UNN5 650 aaPredicted RBP18.51■□□□□ 0.55
TOP3A-213ENST00000582230 PCDHGB6Q9Y5F9 930 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 DOCK10Q96BY6 2186 aa18.51■□□□□ 0.55
TOP3A-213ENST00000582230 A0A1W2PP18 115 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 SLC22A2O15244 555 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 ZNF354AO60765 605 aaPredicted RBP18.5■□□□□ 0.55
TOP3A-213ENST00000582230 NME6O75414 186 aaPredicted RBP18.5■□□□□ 0.55
TOP3A-213ENST00000582230 NEURL1O76050 574 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 HMGN2P05204 90 aaKnown RBP18.5■□□□□ 0.55
TOP3A-213ENST00000582230 ZCCHC18P0CG32 403 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 CD46P15529 392 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 ABCD3P28288 659 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 CORO7P57737 925 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 ZNF169Q14929 603 aaPredicted RBP18.5■□□□□ 0.55
TOP3A-213ENST00000582230 ZNF791Q3KP31 576 aaPredicted RBP18.5■□□□□ 0.55
TOP3A-213ENST00000582230 SLC6A19Q695T7 634 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 SPINK14Q6IE38 97 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 RTL4Q6ZR62 310 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 ZNF621Q6ZSS3 439 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 C6orf120Q7Z4R8 191 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 GOLM1Q8NBJ4 401 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 MDS2Q8NDY4 140 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 OR5AK3PQ8NH89 298 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 SPACA9Q96E40 222 aaPredicted RBP18.5■□□□□ 0.55
TOP3A-213ENST00000582230 BBC3Q96PG8 261 aaPredicted RBP18.5■□□□□ 0.55
TOP3A-213ENST00000582230 SIGLEC12Q96PQ1 595 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 MFRPQ9BY79 579 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 ACTRT3Q9BYD9 372 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 GPATCH2Q9NW75 528 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 GIN1Q9NXP7 522 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 OR10H1Q9Y4A9 318 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 CSAG2Q9Y5P2 127 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 CACNA1GO43497 2377 aa18.5■□□□□ 0.55
TOP3A-213ENST00000582230 RNF103-CHMP3A0A140T963 221 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 NKX2-2O95096 273 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 ANP32DO95626 131 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 CAPN3P20807 821 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 MAP3K8P41279 467 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 ST13P50502 369 aaKnown RBP18.49■□□□□ 0.55
TOP3A-213ENST00000582230 PLCXD2Q0VAA5 305 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 NNATQ16517 81 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 NADK2Q4G0N4 442 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 EXOSC6Q5RKV6 272 aaKnown RBP18.49■□□□□ 0.55
TOP3A-213ENST00000582230 C6orf10Q5SRN2 563 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 NPSR1Q6W5P4 371 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 SLC34A3Q8N130 599 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 GTF2H4Q92759 462 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 C16orf58Q96GQ5 468 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 C5orf34Q96MH7 638 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 PHF12Q96QT6 1004 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 CCT8L2Q96SF2 557 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 SLC35A5Q9BS91 424 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 NMUR2Q9GZQ4 415 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 TIMMDC1Q9NPL8 285 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 ANAPC2Q9UJX6 822 aa18.49■□□□□ 0.55
TOP3A-213ENST00000582230 MRTO4Q9UKD2 239 aaKnown RBP18.49■□□□□ 0.55
TOP3A-213ENST00000582230 TP53I11O14683 189 aa18.48■□□□□ 0.55
TOP3A-213ENST00000582230 PPM1BO75688 479 aa18.48■□□□□ 0.55
TOP3A-213ENST00000582230 SLC25A12O75746 678 aa18.48■□□□□ 0.55
TOP3A-213ENST00000582230 FAM107AO95990 144 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms