RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 NKAIN2Q5VXU1 208 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 ATRAIDQ6UW56 229 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 B3GLCTQ6Y288 498 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 TSEN54Q7Z6J9 526 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 SLC22A16Q86VW1 577 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 TGIF2LYQ8IUE0 185 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 MCOLN2Q8IZK6 566 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 OR4F17Q8NGA8 305 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 FNDC8Q8TC99 324 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 SETD7Q8WTS6 366 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 BCL2L2Q92843 193 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 IMMP1LQ96LU5 166 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 GPR137Q96N19 417 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 OR4F4Q96R69 305 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 HCAR1Q9BXC0 346 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 FUT8Q9BYC5 575 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 SLC5A7Q9GZV3 580 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 MAD2L2Q9UI95 211 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 KLHDC2Q9Y2U9 406 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 MRPS2Q9Y399 296 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 FLVCR1Q9Y5Y0 555 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 ZFP37Q9Y6Q3 630 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 NACAE9PAV3 2078 aa2.14□□□□□ -2.07
SMCHD1-206ENST00000581631 NPIPA5A0A0B4J1W7 369 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 A0A0J9YVX5 310 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 NPIPA5E9PKD4 350 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 CFLARO15519 480 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 ZNF861PO60384 105 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 ATP6V1G1O75348 118 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 NOL4O94818 638 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 ECDO95905 644 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 SERPINF2P08697 491 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 HOXB7P09629 217 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 PSMB1P20618 241 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 IGHV1-2P23083 117 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 DIO3P55073 304 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 UCNP55089 124 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 GNB2P62879 340 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 SMC1AQ14683 1233 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 CLPPQ16740 277 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 DCAF4L1Q3SXM0 396 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 CELF3Q5SZQ8 465 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 PRR5LQ6MZQ0 368 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 SCARA5Q6ZMJ2 495 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 SERPINA12Q8IW75 414 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 LPCAT1Q8NF37 534 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 P3H4Q92791 437 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 SLC25A38Q96DW6 304 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 C19orf24Q9BVV8 132 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 MRPL9Q9BYD2 267 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 NLNQ9BYT8 704 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 OPN3Q9H1Y3 402 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 ZNF702PQ9H963 129 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 AKAP7Q9P0M2 348 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 ENTPD4Q9Y227 616 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 RPH3AQ9Y2J0 694 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 SNX5Q9Y5X3 404 aa2.13□□□□□ -2.07
SMCHD1-206ENST00000581631 LRRD1A4D1F6 860 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 RSPH10B2B2RC85 870 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 CHEK1O14757 476 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 IGLV1-47P01700 117 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 HIST1H2AGP0C0S8 130 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 RSPH10BP0C881 870 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 ZP3P21754 424 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 PTBP1P26599 531 aaKnown RBP eCLIP2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 RPA1P27694 616 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 ACVR1BP36896 505 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 NSFP46459 744 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 PITPNBP48739 271 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 NPY2RP49146 381 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 METAP1P53582 386 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 UCP2P55851 309 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 RIPPLY3P57055 190 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 NLRP11P59045 1033 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 BNIP1Q12981 228 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 ZKSCAN8Q15776 578 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 SLC39A12Q504Y0 691 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 HIST2H2AA3Q6FI13 130 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 TIFABQ6ZNK6 161 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 MOB1BQ7L9L4 216 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 BNIPLQ7Z465 357 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 CADM2Q8N3J6 435 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 HIST1H2ACQ93077 130 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 DNAJA3Q96EY1 480 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 C11orf24Q96F05 449 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 DEFB118Q96PH6 123 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 TSSK1BQ9BXA7 367 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 HES7Q9BYE0 225 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 ABCG4Q9H172 646 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 IL1RAPL2Q9NP60 686 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 ZNF175Q9Y473 711 aa2.12□□□□□ -2.07
SMCHD1-206ENST00000581631 B4DXG7 233 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 TCP11X1B4DZS4 312 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 EMC8O43402 210 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 SDC3O75056 442 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 PGK1P00558 417 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 IGHV3-23P01764 117 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 CENPBP07199 599 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms