RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 C11orf45Q8TAV5 145 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 RIT1Q92963 219 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 CNOT6LQ96LI5 555 aaKnown RBP3.68□□□□□ -1.82
NF1-220ENST00000581113 AGAP4Q96P64 663 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 OVOL2Q9BRP0 275 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 ZSCAN5AQ9BUG6 496 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 RAB33BQ9H082 229 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 TMEM117Q9H0C3 514 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 STMN4Q9H169 189 aaPredicted RBP3.68□□□□□ -1.82
NF1-220ENST00000581113 MINDY3Q9H8M7 445 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 TRPC4Q9UBN4 977 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 MUTYHQ9UIF7 546 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 CDH7Q9ULB5 785 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 EXOC6BQ9Y2D4 811 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 ADAMTSL1Q8N6G6 1762 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 LTBP1Q14766 1721 aa3.68□□□□□ -1.82
NF1-220ENST00000581113 LOC105371242A0A075B767 164 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 IGKV3D-20A0A0C4DH25 116 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 SERTM2A0A1B0GWG4 89 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 FAM47DPA6NHR8 397 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 E9PBE3 544 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 NPIPB9F8W1W9 429 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 H0YIV9 168 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 POLR2DO15514 142 aaKnown RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 UFL1O94874 794 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 SLITRK3O94933 977 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 MOCS2O96007 188 aaPredicted RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 PCCBP05166 539 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 IGKV5-2P06315 115 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 ANKRD34CP0C6C1 535 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 SP9P0CG40 484 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 NEFHP12036 1026 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 FUT1P19526 365 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 ITIH1P19827 911 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 SP100P23497 879 aaPredicted RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 RPS12P25398 132 aaKnown RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 SERPINB6P35237 376 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 KHKP50053 298 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 CARD18P57730 90 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 HAND2P61296 217 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 BNIP1Q12981 228 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 DDX39BQ13838 428 aaKnown RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 SNAI3Q3KNW1 292 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 CCDC122Q5T0U0 273 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 RIPPLY2Q5TAB7 128 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 PAQR6Q6TCH4 344 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 LCLAT1Q6UWP7 414 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 NHLRC1Q6VVB1 395 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 RBM43Q6ZSC3 357 aaKnown RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 GPR141Q7Z602 305 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 PSTKQ8IV42 348 aaKnown RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 ZNF679Q8IYX0 411 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 BBS5Q8N3I7 341 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 LINC00469Q8N7U9 141 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 EIF1ADQ8N9N8 165 aaKnown RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 BCL2L2Q92843 193 aaPredicted RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 CCDC51Q96ER9 411 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 C5orf30Q96GV9 206 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 CAPNS2Q96L46 248 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 ZNF560Q96MR9 790 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 CCDC77Q9BR77 488 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 SIKE1Q9BRV8 207 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 ALKBH7Q9BT30 221 aaPredicted RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 GPR61Q9BZJ8 451 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 NACA2Q9H009 215 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 RPF1Q9H9Y2 349 aaKnown RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 DUOX1Q9NRD9 1551 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.67□□□□□ -1.82
NF1-220ENST00000581113 CHRNA9Q9UGM1 479 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 MRPL11Q9Y3B7 192 aaKnown RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 KLK4Q9Y5K2 254 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 RTL9Q8NET4 1388 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 ANKRD36CQ5JPF3 1778 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 MROH5Q6ZUA9 1318 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 FANCIQ9NVI1 1328 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 PCNTO95613 3336 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 C5orf52A6NGY3 159 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 TFECO14948 347 aaPredicted RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 MAGEB2O15479 319 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 NUDT21O43809 227 aaKnown RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 S100A9P06702 114 aaKnown RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 TAF6P49848 677 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 MS4A2Q01362 244 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 TNFRSF17Q02223 184 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 ELAVL2Q12926 359 aaKnown RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 TSTA3Q13630 321 aaPredicted RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 GCKRQ14397 625 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 ZMYND11Q15326 602 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 DPYSL2Q16555 572 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 FAM106AQ4KMX7 169 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 HERC4Q5GLZ8 1057 aaPredicted RBP3.67□□□□□ -1.82
NF1-220ENST00000581113 PRAMEF8Q5VWM4 474 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 DHRS11Q6UWP2 260 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 C5orf24Q7Z6I8 188 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 VASH2Q86V25 355 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 MYOCDQ8IZQ8 938 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 ARL14Q8N4G2 192 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 PRSS33Q8NF86 280 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 OR7G3Q8NG95 312 aa3.67□□□□□ -1.82
NF1-220ENST00000581113 OR13C2Q8NGS9 318 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms