RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PSG6Q00889 435 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 ZNHIT3Q15649 155 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-203ENST00000580986 CRB2Q5IJ48 1285 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 ATP1A1-AS1Q5TC04 95 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 IRAK1BP1Q5VVH5 260 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 CDC73Q6P1J9 531 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 C8orf82Q6P1X6 216 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-203ENST00000580986 BORAQ6PGQ7 559 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 C6orf89Q6UWU4 347 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 ZNF621Q6ZSS3 439 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 DHDDSQ86SQ9 333 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 HPS6Q86YV9 775 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 GALNT16Q8N428 558 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 OR8J3Q8NGG0 315 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 OR52N2Q8NGI0 321 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 HSPBAP1Q96EW2 488 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 ANKRD27Q96NW4 1050 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 CGREF1Q99674 301 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 SH3GL1Q99961 368 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 HOPXQ9BPY8 73 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-203ENST00000580986 ACTRT3Q9BYD9 372 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 DEFB126Q9BYW3 111 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 RNF32Q9H0A6 362 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 TPT1P8Q9HAU6 139 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 FOLH1BQ9HBA9 442 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 SLC25A37Q9NYZ2 338 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 VAPAQ9P0L0 249 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 MYOTQ9UBF9 498 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 BCAP29Q9UHQ4 241 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 TUBD1Q9UJT1 453 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 ZMIZ1Q9ULJ6 1067 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 GPR55Q9Y2T6 319 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-203ENST00000580986 PCDHGB3Q9Y5G1 929 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 SNX8Q9Y5X2 465 aa9.64□□□□□ -0.87
CCDC47-203ENST00000580986 LOC100653049A0A140TA62 436 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 C2orf92A0A1B0GVN3 265 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 ARGFXA6NJG6 315 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 CCT8L1PA6NM43 557 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 CLIC1O00299 241 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 HNRNPCL1O60812 293 aaKnown RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 KRT34O76011 436 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 CPSF4O95639 269 aaKnown RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 CT45A8P0DMV1 189 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 CT45A9P0DMV2 189 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 ITGAMP11215 1152 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 GPX2P18283 190 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 EFNA1P20827 205 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 LCN1P31025 176 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 TRHRP34981 398 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 SOAT1P35610 550 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 MAN2A2P49641 1150 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 TMED10P49755 219 aaKnown RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 MVDP53602 400 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 GABPB1Q06547 395 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 TP53BP2Q13625 1128 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 NFYCQ13952 458 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 EXOSC7Q15024 291 aaKnown RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 MEP1AQ16819 746 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 DEFB109BQ30KR1 87 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 SPDYE7PQ495Y7 208 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 CYP27C1Q4G0S4 372 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 RUNDC3AQ59EK9 446 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 CT45A2Q5DJT8 189 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 IGFL2Q6UWQ7 119 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 C6orf120Q7Z4R8 191 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 RPS19BP1Q86WX3 136 aaKnown RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 MSRB3Q8IXL7 192 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 GPALPP1Q8IXQ4 340 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 TAGAPQ8N103 731 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 KIF2BQ8N4N8 673 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 ZNF321PQ8N8H1 164 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 SLC22A8Q8TCC7 542 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 OIT3Q8WWZ8 545 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 LRRC58Q96CX6 371 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 RCN3Q96D15 328 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 THOC3Q96J01 351 aaKnown RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 LCORQ96JN0 433 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 SLC35G5Q96KT7 338 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 ZNF354BQ96LW1 612 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 LMF1Q96S06 567 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 GPATCH1Q9BRR8 931 aaKnown RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 SPATA9Q9BWV2 254 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 C1orf21Q9H246 121 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 PIGUQ9H490 435 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 PRORYQ9H606 182 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 TRIM45Q9H8W5 580 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 CPNE5Q9HCH3 593 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 Q9N2J8 555 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 SLC6A13Q9NSD5 602 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 FAF1Q9UNN5 650 aaPredicted RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 YARS2Q9Y2Z4 477 aaKnown RBP9.63□□□□□ -0.87
CCDC47-203ENST00000580986 ZNF451Q9Y4E5 1061 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 ACACBO00763 2458 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 ZZEF1O43149 2961 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 DOCK10Q96BY6 2186 aa9.63□□□□□ -0.87
CCDC47-203ENST00000580986 NUP214P35658 2090 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-203ENST00000580986 EVPLLA8MZ36 301 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 ALPPP05187 535 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 ESRRAP11474 423 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-203ENST00000580986 ITGA3P26006 1051 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms