RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ECSITQ9BQ95 431 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 MESP1Q9BRJ9 268 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 LMF2Q9BU23 707 aaKnown RBP13.25□□□□□ -0.29
SKA2-205ENST00000580541 WWTR1Q9GZV5 400 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 C1orf21Q9H246 121 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 PIGUQ9H490 435 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 EQTNQ9NQ60 294 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 DUSP22Q9NRW4 184 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 STMN3Q9NZ72 180 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 VAPAQ9P0L0 249 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 MYOTQ9UBF9 498 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 ERVK-11Q9UQG0 969 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 LIPT1Q9Y234 373 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 L3MBTL1Q9Y468 752 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 KCNMB2Q9Y691 235 aa13.25□□□□□ -0.29
SKA2-205ENST00000580541 FRG2CA6NGY1 282 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 CBX6O95503 412 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 AK1P00568 194 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 ITGAMP11215 1152 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 CD1EP15812 388 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 PTPN6P29350 595 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 GABRA3P34903 492 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 CRATP43155 626 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 TMED10P49755 219 aaKnown RBP13.24□□□□□ -0.29
SKA2-205ENST00000580541 CCL11P51671 97 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 CXADRP78310 365 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 EBPQ15125 230 aaKnown RBP13.24□□□□□ -0.29
SKA2-205ENST00000580541 NANOGP8Q6NSW7 305 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 OPN5Q6U736 354 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 C6orf89Q6UWU4 347 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 RNF130Q86XS8 419 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 SLC44A2Q8IWA5 706 aaPredicted RBP13.24□□□□□ -0.29
SKA2-205ENST00000580541 C9orf40Q8IXQ3 194 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 ARMC10Q8N2F6 343 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 ZNF321PQ8N8H1 164 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 GPR151Q8TDV0 419 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 ADIPOR1Q96A54 375 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 VSTM2LQ96N03 204 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 BTBD9Q96Q07 612 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 LMF1Q96S06 567 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 SPATA9Q9BWV2 254 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 CDCP1Q9H5V8 836 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 ANKRA2Q9H9E1 313 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 NANOGQ9H9S0 305 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 CPNE5Q9HCH3 593 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 GPATCH2Q9NW75 528 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 SLAMF8Q9P0V8 285 aa13.24□□□□□ -0.29
SKA2-205ENST00000580541 GPR55Q9Y2T6 319 aaPredicted RBP13.24□□□□□ -0.29
SKA2-205ENST00000580541 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 TO15178 435 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 DNAJA2O60884 412 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 UBOX5O94941 541 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 CLPSP04118 112 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 NAGAP17050 411 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 GPX2P18283 190 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 SOX18P35713 384 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 CASRP41180 1078 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 NR0B1P51843 470 aaKnown RBP13.23□□□□□ -0.29
SKA2-205ENST00000580541 RPP38P78345 283 aaKnown RBP13.23□□□□□ -0.29
SKA2-205ENST00000580541 Q0VFX4 171 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 GAB1Q13480 694 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 RGNQ15493 299 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 DECR1Q16698 335 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 SPATS1Q496A3 300 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 PIGGQ5H8A4 983 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 ISLR2Q6UXK2 745 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 GPALPP1Q8IXQ4 340 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 KIF2BQ8N4N8 673 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 TMEM156Q8N614 296 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 METTL25Q8N6Q8 603 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 HORMAD2Q8N7B1 307 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 COX18Q8N8Q8 333 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 BRIX1Q8TDN6 353 aaKnown RBP13.23□□□□□ -0.29
SKA2-205ENST00000580541 XAGE5Q8WWM1 108 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 TM9SF4Q92544 642 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 HOXB13Q92826 284 aaPredicted RBP13.23□□□□□ -0.29
SKA2-205ENST00000580541 GIMAP5Q96F15 307 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 G6PC3Q9BUM1 346 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 BTBD2Q9BX70 525 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 ITPAQ9BY32 194 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 TRIM4Q9C037 500 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 EPS8L2Q9H6S3 715 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 SPAG4Q9NPE6 437 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 GPR83Q9NYM4 423 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 SLC25A37Q9NYZ2 338 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 CALML5Q9NZT1 146 aa13.23□□□□□ -0.29
SKA2-205ENST00000580541 ZNF223Q9UK11 482 aaPredicted RBP13.23□□□□□ -0.29
SKA2-205ENST00000580541 DOCK10Q96BY6 2186 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 TRBV5-3A0A0A0MS03 114 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 A6NL46 340 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 MKRN2OSH3BPM6 223 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 HS6ST1O60243 411 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 NKX2-2O95096 273 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 UNC5CO95185 931 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 CT45A8P0DMV1 189 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 CT45A9P0DMV2 189 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 LCN1P31025 176 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 TRHRP34981 398 aaPredicted RBP13.22□□□□□ -0.29
SKA2-205ENST00000580541 CPA2P48052 419 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 SSR4P51571 173 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms