RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 NCLNQ969V3 563 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 C16orf58Q96GQ5 468 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 CLPTM1LQ96KA5 538 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 VSTM2LQ96N03 204 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 OR7D2Q96RA2 312 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 NUDT9Q9BW91 350 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 PIGUQ9H490 435 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 SERHL2Q9H4I8 314 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 A4GALTQ9NPC4 353 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 DUSP22Q9NRW4 184 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 ZNF451Q9Y4E5 1061 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 CFAP54Q96N23 3096 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 NSG1A0A0A6YYJ2 146 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 HMGN4O00479 90 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 PEX12O00623 359 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 GMNNO75496 209 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 NKX2-2O95096 273 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 STAMBPO95630 424 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 AK1P00568 194 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 HPP00738 406 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 OR12D1P0DN82 309 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 ARAFP10398 606 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 ICAM2P13598 275 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 LIFP15018 202 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 SPINK2P20155 84 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 MAP3K8P41279 467 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 CLCN2P51788 898 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 AP2B1P63010 937 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 TRAP1Q12931 704 aaKnown RBP9.98□□□□□ -0.81
SS18-213ENST00000579640 VEZF1Q14119 521 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 TRIM25Q14258 630 aaKnown RBP9.98□□□□□ -0.81
SS18-213ENST00000579640 TGIF1Q15583 401 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 VMACQ2NL98 169 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 PLAG1Q6DJT9 500 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 PTRH1Q86Y79 214 aaKnown RBP9.98□□□□□ -0.81
SS18-213ENST00000579640 PTOV1Q86YD1 416 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 HPS6Q86YV9 775 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 ZZZ3Q8IYH5 903 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 C10orf111Q8N326 155 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 APCDD1LQ8NCL9 501 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 C17orf47Q8NEP4 570 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 M1APQ8TC57 530 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 SLC9A6Q92581 669 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 UTP4Q969X6 686 aaKnown RBP9.98□□□□□ -0.81
SS18-213ENST00000579640 ASB9Q96DX5 294 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 IMMP1LQ96LU5 166 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 YIPF4Q9BSR8 244 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 P2RX2Q9UBL9 471 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 IL17BQ9UHF5 180 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 SLC7A8Q9UHI5 535 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 PACSIN3Q9UKS6 424 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 LIPT1Q9Y234 373 aa9.98□□□□□ -0.81
SS18-213ENST00000579640 ADRB1P08588 477 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 ACP2P11117 423 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 TCN1P20061 433 aaPredicted RBP9.97□□□□□ -0.81
SS18-213ENST00000579640 PCGF2P35227 344 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 PPICP45877 212 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 CASP9P55211 416 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 CLN3Q13286 438 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 IL10RAQ13651 578 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 EBPQ15125 230 aaKnown RBP9.97□□□□□ -0.81
SS18-213ENST00000579640 ADRM1Q16186 407 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 INTS11Q5TA45 600 aaKnown RBP9.97□□□□□ -0.81
SS18-213ENST00000579640 PRAMEF8Q5VWM4 474 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 PRAMEF7Q5VXH5 474 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 HLA-DQA1Q5Y7H0 255 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 HSDL2Q6YN16 418 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 MRGPREQ86SM8 312 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 PROSER1Q86XN7 944 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 ZNF321PQ8N8H1 164 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 SLC16A11Q8NCK7 471 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 ZNF248Q8NDW4 579 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 OR5D16Q8NGK9 328 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 OR5L2Q8NGL0 311 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 NUBPLQ8TB37 319 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 ADAMTS17Q8TE56 1095 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 XAGE5Q8WWM1 108 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 CCDC124Q96CT7 223 aaKnown RBP9.97□□□□□ -0.81
SS18-213ENST00000579640 BTBD9Q96Q07 612 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 MESP1Q9BRJ9 268 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 PIF1Q9H611 641 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 Q9N2J8 555 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 MMP25Q9NPA2 562 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 RYDENQ9NUL5 291 aaKnown RBP9.97□□□□□ -0.81
SS18-213ENST00000579640 P4HTMQ9NXG6 502 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 CALML5Q9NZT1 146 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 DKK4Q9UBT3 224 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 MAGEL2Q9UJ55 1249 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 ANGPT4Q9Y264 503 aa9.97□□□□□ -0.81
SS18-213ENST00000579640 C2orf92A0A1B0GVN3 265 aa9.96□□□□□ -0.81
SS18-213ENST00000579640 C5orf58C9J3I9 102 aa9.96□□□□□ -0.81
SS18-213ENST00000579640 GSTA4O15217 222 aa9.96□□□□□ -0.81
SS18-213ENST00000579640 ZFAND5O76080 213 aa9.96□□□□□ -0.81
SS18-213ENST00000579640 NUDT7P0C024 238 aa9.96□□□□□ -0.81
SS18-213ENST00000579640 TFPTP0C1Z6 253 aa9.96□□□□□ -0.81
SS18-213ENST00000579640 DRD5P21918 477 aa9.96□□□□□ -0.81
SS18-213ENST00000579640 TRHRP34981 398 aaPredicted RBP9.96□□□□□ -0.81
SS18-213ENST00000579640 RNF4P78317 190 aa9.96□□□□□ -0.81
SS18-213ENST00000579640 CDK6Q00534 326 aa9.96□□□□□ -0.81
SS18-213ENST00000579640 PSG6Q00889 435 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms