RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 ERN1O75460 977 aaKnown RBP13.61□□□□□ -0.23
SS18-212ENST00000579061 ATP6AP2O75787 350 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 RFPL3SP0C7P2 107 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 LINC00032P0C843 101 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 COL8A1P27658 744 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 DCTP40126 519 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 ASMTP46597 345 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 MAN2A2P49641 1150 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 NCBP2P52298 156 aaKnown RBP eCLIP13.61□□□□□ -0.231e-8■■■□□ 16.9
SS18-212ENST00000579061 RPL38P63173 70 aaKnown RBP13.61□□□□□ -0.23
SS18-212ENST00000579061 PLCXD2Q0VAA5 305 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 SNTA1Q13424 505 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 PRSS53Q2L4Q9 553 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 RFTN2Q52LD8 501 aaPredicted RBP13.61□□□□□ -0.23
SS18-212ENST00000579061 EMC4Q5J8M3 183 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 SH2D4BQ5SQS7 431 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 EXOC3L1Q86VI1 746 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 PACS2Q86VP3 889 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 NUDCD3Q8IVD9 361 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 PRR22Q8IZ63 422 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 OR7G2Q8NG99 324 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 HGDQ93099 445 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 SARAFQ96BY9 339 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 TMEM41AQ96HV5 264 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 EGLN2Q96KS0 407 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 PPP3R2Q96LZ3 170 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 VSTM2LQ96N03 204 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 RILPQ96NA2 401 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 ZIM3Q96PE6 472 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 GLIPR2Q9H4G4 154 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 LDAHQ9H6V9 325 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 C19orf53Q9UNZ5 99 aaPredicted RBP13.61□□□□□ -0.23
SS18-212ENST00000579061 LIPGQ9Y5X9 500 aa13.61□□□□□ -0.23
SS18-212ENST00000579061 TRGV5A0A0B4J1U4 118 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 OR6C70A6NIJ9 312 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 TMEM233B4DJY2 109 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 NPIPA2E9PIF3 369 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 NPIPA3F8WFD2 350 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 PIP5K1BO14986 540 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 JUNP05412 331 aaKnown RBP13.6□□□□□ -0.23
SS18-212ENST00000579061 CELA3AP09093 270 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 CT45A8P0DMV1 189 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 CT45A9P0DMV2 189 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 SDC1P18827 310 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 TACR1P25103 407 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 MAPK1P28482 360 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 SERPINB4P48594 390 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 NNATQ16517 81 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 GXYLT1Q4G148 440 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 CT45A2Q5DJT8 189 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 XKR7Q5GH72 579 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 CEP85LQ5SZL2 805 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 SLC30A6Q6NXT4 461 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 LRIG3Q6UXM1 1119 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 DDIASQ8IXT1 998 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 MTERF3Q96E29 417 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 PGM2Q96G03 612 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 SLC35A4Q96G79 324 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 JSRP1Q96MG2 331 aaPredicted RBP13.6□□□□□ -0.23
SS18-212ENST00000579061 AMDHD1Q96NU7 426 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 REEP4Q9H6H4 257 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 FOLH1BQ9HBA9 442 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 ZDHHC2Q9UIJ5 367 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 PCDHGB3Q9Y5G1 929 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 HRH3Q9Y5N1 445 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 CELSR2Q9HCU4 2923 aa13.6□□□□□ -0.23
SS18-212ENST00000579061 TTC36A6NLP5 189 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 FIGNL2A6NMB9 653 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 TMEM114B3SHH9 223 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 PRSS44E7EML9 344 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 PDPK1O15530 556 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 TSPAN2O60636 221 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 SNUPNO95149 360 aaKnown RBP13.59□□□□□ -0.23
SS18-212ENST00000579061 ZWINTO95229 277 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 LRATO95237 230 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 PSMG1O95456 288 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 HOXD4P09016 255 aaPredicted RBP13.59□□□□□ -0.23
SS18-212ENST00000579061 MYZAPP0CAP1 466 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 DHRS4L1P0CG22 281 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 DDX5P17844 614 aaKnown RBP13.59□□□□□ -0.23
SS18-212ENST00000579061 ELAVL4P26378 380 aaKnown RBP13.59□□□□□ -0.23
SS18-212ENST00000579061 ARRB2P32121 409 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 FRKP42685 505 aaPredicted RBP13.59□□□□□ -0.23
SS18-212ENST00000579061 MASP1P48740 699 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 PDE7AQ13946 482 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 ZNF630Q2M218 657 aaPredicted RBP13.59□□□□□ -0.23
SS18-212ENST00000579061 GALNTL6Q49A17 601 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 FNDC7Q5VTL7 733 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 BICRALQ6AI39 1079 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 R3HCC1LQ7Z5L2 792 aaKnown RBP13.59□□□□□ -0.23
SS18-212ENST00000579061 PIAS4Q8N2W9 510 aaPredicted RBP13.59□□□□□ -0.23
SS18-212ENST00000579061 OR2L13Q8N349 312 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 ZFP28Q8NHY6 868 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 TMCO6Q96DC7 493 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 COL21A1Q96P44 957 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 NODALQ96S42 347 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 OSBPL11Q9BXB4 747 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 UBQLN3Q9H347 655 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 EXO5Q9H790 373 aa13.59□□□□□ -0.23
SS18-212ENST00000579061 METTL7AQ9H8H3 244 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms