RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 SFRP5Q5T4F7 317 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 TSPAN33Q86UF1 283 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 DCUN1D3Q8IWE4 304 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 UEVLDQ8IX04 471 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 TMEM234Q8WY98 164 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 LGALS12Q96DT0 336 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 PWWP2AQ96N64 755 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 EPHA6Q9UF33 1036 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 MYO7BQ6PIF6 2116 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 SULT1C2O00338 296 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 HTR2AP28223 471 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 GABRA4P48169 554 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 COL9A3Q14050 684 aaPredicted RBP8.47□□□□□ -1.05
CDH8-203ENST00000577390 ZBTB37Q5TC79 503 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 TRIB2Q92519 343 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 RHBDF1Q96CC6 855 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 S100A16Q96FQ6 103 aaKnown RBP8.47□□□□□ -1.05
CDH8-203ENST00000577390 AGAP2Q99490 1192 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 NDRG3Q9UGV2 375 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 MED16Q9Y2X0 877 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 A0A1W2PPH5 198 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 KCNU1A8MYU2 1149 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 H7BYZ3 331 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 YY2O15391 372 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 S1PR1P21453 382 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 FXYD4P59646 89 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 TMEM119Q4V9L6 283 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 MON1AQ86VX9 555 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 SHKBP1Q8TBC3 707 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 TGM7Q96PF1 710 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 ZBTB20Q9HC78 741 aaPredicted RBP8.47□□□□□ -1.05
CDH8-203ENST00000577390 IL36AQ9UHA7 158 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 PTGR1Q14914 329 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 VARS2Q5ST30 1063 aaKnown RBP8.47□□□□□ -1.05
CDH8-203ENST00000577390 AKR1C8PQ5T2L2 129 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 AVPI1Q5T686 147 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 ABHD12BQ7Z5M8 362 aaPredicted RBP8.47□□□□□ -1.05
CDH8-203ENST00000577390 KIAA1958Q8N8K9 716 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 MOAP1Q96BY2 351 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 CCDC74BQ96LY2 380 aa8.47□□□□□ -1.05
CDH8-203ENST00000577390 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDH8-203ENST00000577390 ABCA1O95477 2261 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 SLC35F4A4IF30 521 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 hCG_2039718K7EN88 272 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 SLC16A5O15375 505 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 ZBTB2Q8N680 514 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 TMEM209Q96SK2 561 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 SNRNP25Q9BV90 132 aaKnown RBP8.46□□□□□ -1.05
CDH8-203ENST00000577390 ZNF98A6NK75 572 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 SCGB1C2P0DMR2 95 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 RAP2AP10114 183 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 MAKP20794 623 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 L1CAMP32004 1257 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 SEC23BQ15437 767 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 SYT16Q17RD7 645 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 C4orf17Q53FE4 359 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 CST9LP1Q5W188 147 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 ZNF461Q8TAF7 563 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 FCAMRQ8WWV6 532 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 IPPKQ9H8X2 491 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 KCNQ5Q9NR82 932 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 OR14J1Q9UGF5 321 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 DDX60Q8IY21 1712 aaKnown RBP8.46□□□□□ -1.05
CDH8-203ENST00000577390 PSME4Q14997 1843 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 BCORQ6W2J9 1755 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 DUX1O43812 170 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 MPZL2O60487 215 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 CLCN5P51795 746 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 CMTM1Q8IZ96 169 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 ST7LQ8TDW4 575 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 TNFRSF25Q93038 417 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 KLHDC7BQ96G42 594 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 SEC22CQ9BRL7 303 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 WWTR1Q9GZV5 400 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 OR2S2Q9NQN1 319 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 GPATCH2Q9NW75 528 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 TMX2Q9Y320 296 aa8.46□□□□□ -1.05
CDH8-203ENST00000577390 ANKRD61A6NGH8 418 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 ZNF815PA8K554 130 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 OR7A17O14581 309 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 SNAPINO95295 136 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 GLB1P16278 677 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 CDNFQ49AH0 187 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 USP53Q70EK8 1073 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 RSC1A1Q92681 617 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 NXF3Q9H4D5 531 aaKnown RBP8.46□□□□□ -1.06
CDH8-203ENST00000577390 NRP1O14786 923 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 ASPAP45381 313 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 CDC34P49427 236 aaPredicted RBP8.46□□□□□ -1.06
CDH8-203ENST00000577390 RACK1P63244 317 aaKnown RBP8.46□□□□□ -1.06
CDH8-203ENST00000577390 PPP1R3AQ16821 1122 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 FLYWCH1Q4VC44 716 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 TEX44Q53QW1 395 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 ZNF704Q6ZNC4 412 aaPredicted RBP8.46□□□□□ -1.06
CDH8-203ENST00000577390 NLRC3Q7RTR2 1065 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 MRPL21Q7Z2W9 205 aaKnown RBP8.46□□□□□ -1.06
CDH8-203ENST00000577390 PLPP6Q8IY26 295 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 OR1S1Q8NH92 325 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 PXYLP1Q8TE99 480 aa8.46□□□□□ -1.06
CDH8-203ENST00000577390 CYB5D2Q8WUJ1 264 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms