RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 IL22RA1Q8N6P7 574 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 CDRT4Q8N9R6 151 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 MORN4Q8NDC4 146 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 NFKBIDQ8NI38 313 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 ADAMTS15Q8TE58 950 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 DCHS1Q96JQ0 3298 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 ART5Q96L15 291 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 LPAR4Q99677 370 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 GPR87Q9BY21 358 aa22.35■■□□□ 1.17
ATPAF1-213ENST00000574428 LOC102723996A0A087X1L8 192 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 TRABD2BA6NFA1 517 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 ARAFP10398 606 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 MAGEA8P43361 318 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 TRAP1Q12931 704 aaKnown RBP22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 RCN1Q15293 331 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 TGIF1Q15583 401 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 RNF111Q6ZNA4 994 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 DHFR2Q86XF0 187 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 NFAM1Q8NET5 270 aaPredicted RBP22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 BHLHE22Q8NFJ8 381 aaPredicted RBP22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 OR1N1Q8NGS0 311 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 CDS1Q92903 461 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 NCLNQ969V3 563 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 SLC35A4Q96G79 324 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 VSTM2LQ96N03 204 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 A4GALTQ9NPC4 353 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 COPS7AQ9UBW8 275 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 MAGEL2Q9UJ55 1249 aa22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 MRPS18BQ9Y676 258 aaKnown RBP22.34■■□□□ 1.17
ATPAF1-213ENST00000574428 PRAMEF27A3QJZ7 478 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 CXCR6O00574 342 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 ASNA1O43681 348 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 BCHEP06276 602 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 ALOX5P09917 674 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 MMP11P24347 488 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 OTX2P32243 289 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 PCGF2P35227 344 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 SCARB2Q14108 478 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 EXOSC6Q5RKV6 272 aaKnown RBP22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 GLYATQ6IB77 296 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 ZCCHC12Q6PEW1 402 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 B3GNT7Q8NFL0 401 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 SLC38A5Q8WUX1 472 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 ACTR3BQ9P1U1 418 aa22.33■■□□□ 1.17
ATPAF1-213ENST00000574428 AHCTF1Q8WYP5 2266 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 TFPTP0C1Z6 253 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 AQP1P29972 269 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 CDK6Q00534 326 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 RBBP4Q09028 425 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 FUT5Q11128 374 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 CCNIQ14094 377 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 PCOLCEQ15113 449 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 SYPL1Q16563 259 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 ZNF630Q2M218 657 aaPredicted RBP22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 PPP1R32Q7Z5V6 425 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 GALNT10Q86SR1 603 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 NXPE2Q96DL1 559 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 ITPAQ9BY32 194 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 MUC13Q9H3R2 512 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 THUMPD1Q9NXG2 353 aaKnown RBP22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 P2RX2Q9UBL9 471 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 PRODH2Q9UF12 536 aa22.33■■□□□ 1.16
ATPAF1-213ENST00000574428 SOCS6O14544 535 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 IGHEP01854 428 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 MAP3K8P41279 467 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 GPR143P51810 404 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 TXNL4AP83876 142 aaKnown RBP22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 MAPK11Q15759 364 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 NNATQ16517 81 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 KIRREL2Q6UWL6 708 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 OLIG3Q7RTU3 272 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 SPPL2CQ8IUH8 684 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 GPR151Q8TDV0 419 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 PIK3R3Q92569 461 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 HOXB13Q92826 284 aaPredicted RBP22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 FAM122AQ96E09 287 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 TMEM19Q96HH6 336 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 LMF2Q9BU23 707 aaKnown RBP22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 PIGUQ9H490 435 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 WDR70Q9NW82 654 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 IL17BQ9UHF5 180 aa22.32■■□□□ 1.16
ATPAF1-213ENST00000574428 IGHV1-45A0A0A0MS14 117 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 DUXAA6NLW8 204 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 SLC28A2O43868 658 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 PRKNO60260 465 aaPredicted RBP22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 GMNNO75496 209 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 STAMBPO95630 424 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 NR2F1P10589 423 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 COX6A1P12074 109 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 GABRA3P34903 492 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 SLC26A5P58743 744 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 PSG6Q00889 435 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 IL10RAQ13651 578 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 PUM1Q14671 1186 aaKnown RBP eCLIP22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 SSPNQ14714 243 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 ZNHIT3Q15649 155 aaPredicted RBP22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 RPS26P11Q5JNZ5 115 aaPredicted RBP22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 LCN8Q6JVE9 175 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 PROSER1Q86XN7 944 aa22.31■■□□□ 1.16
ATPAF1-213ENST00000574428 C9orf40Q8IXQ3 194 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms