RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 RABEP2Q9H5N1 569 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 CCDC134Q9H6E4 229 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 ANKRD10Q9NXR5 420 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 ASIC5Q9NY37 505 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 ATP6V1HQ9UI12 483 aa12.31□□□□□ -0.44
CCDC40-205ENST00000571028 ZNF223Q9UK11 482 aaPredicted RBP12.31□□□□□ -0.44
CCDC40-205ENST00000571028 NAV3Q8IVL0 2385 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 A0A1W2PRB8 838 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 FAM221AA4D161 298 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 MYO1GB0I1T2 1018 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 WWP2O00308 870 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 CFLARO15519 480 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 NME6O75414 186 aaPredicted RBP12.3□□□□□ -0.44
CCDC40-205ENST00000571028 ZFAND5O76080 213 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 ATP1B1P05026 303 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 ABCB1P08183 1280 aaPredicted RBP12.3□□□□□ -0.44
CCDC40-205ENST00000571028 GPR143P51810 404 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 ARFIP2P53365 341 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 MANFP55145 182 aaKnown RBP12.3□□□□□ -0.44
CCDC40-205ENST00000571028 STX1BP61266 288 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 PDE7AQ13946 482 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 TERF2Q15554 542 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 MPEG1Q2M385 716 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 PRICKLE4Q2TBC4 344 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 KRTCAP3Q53RY4 240 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 ZNF766Q5HY98 468 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 OR4F3Q6IEY1 312 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 CGB2Q6NT52 195 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 TMEM107Q6UX40 140 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 RNF111Q6ZNA4 994 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 SZRD1Q7Z422 152 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 VWA5B2Q8N398 1253 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 SLC5A8Q8N695 610 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 SIMC1Q8NDZ2 872 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 OR52R1Q8NGF1 315 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 ZFP28Q8NHY6 868 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 ELP5Q8TE02 316 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 PSMF1Q92530 271 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 MTERF3Q96E29 417 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 CHMP6Q96FZ7 201 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 GPR137Q96N19 417 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 ZBTB18Q99592 522 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 CCDC28BQ9BUN5 200 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 DUSP26Q9BV47 211 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 ATAD3AQ9NVI7 634 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 STMN3Q9NZ72 180 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 MAT2BQ9NZL9 334 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 GPR45Q9Y5Y3 372 aa12.3□□□□□ -0.44
CCDC40-205ENST00000571028 ANKHD1Q8IWZ3 2542 aaKnown RBP12.3□□□□□ -0.44
CCDC40-205ENST00000571028 SPG11Q96JI7 2443 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 TMEM200CA6NKL6 621 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 CPSF4O95639 269 aaKnown RBP12.29□□□□□ -0.44
CCDC40-205ENST00000571028 C6orf47O95873 294 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 IDO1P14902 403 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 DDX5P17844 614 aaKnown RBP12.29□□□□□ -0.44
CCDC40-205ENST00000571028 KLK2P20151 261 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 S100A3P33764 101 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 GALNSP34059 522 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 MC3RP41968 323 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 DGKQP52824 942 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 PRKAG1P54619 331 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 ALDH6A1Q02252 535 aaKnown RBP12.29□□□□□ -0.44
CCDC40-205ENST00000571028 MAP4K2Q12851 820 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 SPRED3Q2MJR0 410 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 ZNF628Q5EBL2 1059 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 ACER2Q5QJU3 275 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 HLA-DQA1Q5Y7H0 255 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 PAOXQ6QHF9 649 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 NCCRP1Q6ZVX7 275 aaPredicted RBP12.29□□□□□ -0.44
CCDC40-205ENST00000571028 ANKRD46Q86W74 232 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 RPS19BP1Q86WX3 136 aaKnown RBP12.29□□□□□ -0.44
CCDC40-205ENST00000571028 TGIF2LYQ8IUE0 185 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 RIMKLAQ8IXN7 391 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 C9orf40Q8IXQ3 194 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 BEST3Q8N1M1 668 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 ZBED6CLQ96FA7 236 aaPredicted RBP12.29□□□□□ -0.44
CCDC40-205ENST00000571028 FBXL20Q96IG2 436 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 TEX37Q96LM6 180 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 ZNF354BQ96LW1 612 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 AMDHD1Q96NU7 426 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 ZNF559Q9BR84 538 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 TSPAN10Q9H1Z9 355 aaPredicted RBP12.29□□□□□ -0.44
CCDC40-205ENST00000571028 OR10A5Q9H207 317 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 TAS2R7Q9NYW3 318 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 SNX8Q9Y5X2 465 aa12.29□□□□□ -0.44
CCDC40-205ENST00000571028 NPIPA5E9PKD4 350 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 PRRG2O14669 202 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 TBX19O60806 448 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 SLC22A3O75751 556 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 IL12AP29459 219 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 SOAT1P35610 550 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 CDK9P50750 372 aaKnown RBP12.28□□□□□ -0.44
CCDC40-205ENST00000571028 CLNS1AP54105 237 aaKnown RBP12.28□□□□□ -0.44
CCDC40-205ENST00000571028 SLC37A1P57057 533 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 RNF4P78317 190 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 OC90Q02509 493 aaPredicted RBP12.28□□□□□ -0.44
CCDC40-205ENST00000571028 MGAT2Q10469 447 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 NNATQ16517 81 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 GSTA3Q16772 222 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 MEP1AQ16819 746 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms