RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 NNATQ16517 81 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 HYAL4Q2M3T9 481 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 SMU1Q2TAY7 513 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 CMPK2Q5EBM0 449 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 PRAMEF20Q5VT98 475 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 IL23RQ5VWK5 629 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 C1QL3Q5VWW1 255 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 TMEM107Q6UX40 140 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 Q6ZPB1 254 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 NUP54Q7Z3B4 507 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 FJX1Q86VR8 437 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 PRR22Q8IZ63 422 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 LIX1Q8N485 282 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 ZFP28Q8NHY6 868 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 SPPL2AQ8TCT8 520 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 MGARPQ8TDB4 240 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 DIO2Q92813 273 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 ELP4Q96EB1 424 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 ZBED6CLQ96FA7 236 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 MAGED4Q96JG8 741 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 BTBD9Q96Q07 612 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 C1orf50Q9BV19 199 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 ZDHHC11Q9H8X9 412 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 FOLH1BQ9HBA9 442 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 PROK2Q9HC23 129 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 TUBA8Q9NY65 449 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 CNOT11Q9UKZ1 510 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 C19orf53Q9UNZ5 99 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 EIF3LQ9Y262 564 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 PHF3Q92576 2039 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 NCOA6Q14686 2063 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 PCNX3Q9H6A9 2034 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 FAM166BA8MTA8 275 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 UPK1AO00322 258 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 CDC40O60508 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 CT45A8P0DMV1 189 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 CT45A9P0DMV2 189 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 ABOP16442 354 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 MC3RP41968 323 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 FRKP42685 505 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 CA7P43166 264 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 MANFP55145 182 aaKnown RBP12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 KCNJ2P63252 427 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 PSPHP78330 225 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 HSF1Q00613 529 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 EMX2Q04743 252 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 PLCXD2Q0VAA5 305 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 ZNF385BQ569K4 471 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 CT45A2Q5DJT8 189 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 TMEM198Q66K66 360 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 ATG16L1Q676U5 607 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 ANKRD26P1Q6NSI1 321 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 ZNF551Q7Z340 670 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 HDXQ7Z353 690 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 TRIM42Q8IWZ5 723 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 SLC34A3Q8N130 599 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 OR2L13Q8N349 312 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 FAM109AQ8N4B1 249 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 TMEM251Q8N6I4 163 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 CIDECQ96AQ7 238 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 ARL8AQ96BM9 186 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 OMA1Q96E52 524 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 VSTM2LQ96N03 204 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 PSMG3-AS1Q96PY0 264 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 DOHHQ9BU89 302 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 DEFB127Q9H1M4 99 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 ZFP64Q9NPA5 681 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 ACSS1Q9NUB1 689 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 THAP1Q9NVV9 213 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 ATP6V1HQ9UI12 483 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 BOKQ9UMX3 212 aaPredicted RBP12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 DOPEY1Q5JWR5 2465 aa12.69□□□□□ -0.38
HERPUD1-218ENST00000569569 HECTD1Q9ULT8 2610 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 A0A1B0GTH9 108 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 SCAMP2O15127 329 aaKnown RBP12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 NME6O75414 186 aaPredicted RBP12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 PDE9AO76083 593 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 SNX4O95219 450 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 GPC1P35052 558 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 HPCAL1P37235 193 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 CASP3P42574 277 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 MAGEA5P43359 124 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 HSPB3Q12988 150 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 PTGR1Q14914 329 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 SLC10A1Q14973 349 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 ARHGAP11AQ6P4F7 1023 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 TMEM81Q6P7N7 255 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 CHERPQ8IWX8 916 aaKnown RBP12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 NATD1Q8N6N6 113 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 RAB3IL1Q8TBN0 382 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 TMBIM1Q969X1 311 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 PPP1R36Q96LQ0 422 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 PRPF18Q99633 342 aaKnown RBP12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 ANGPTL4Q9BY76 406 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 MANSC1Q9H8J5 431 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 AKTIPQ9H8T0 292 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 DDX18Q9NVP1 670 aaKnown RBP12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 PNPOQ9NVS9 261 aa12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 NOP53Q9NZM5 478 aaKnown RBP12.68□□□□□ -0.38
HERPUD1-218ENST00000569569 ARHGAP21Q5T5U3 1957 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms