RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 TPRG1LQ5T0D9 272 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 CYP4Z2PQ8N1L4 340 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 SIMC1Q8NDZ2 872 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 CREB3L4Q8TEY5 395 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 CNRIP1Q96F85 164 aaPredicted RBP8.25□□□□□ -1.09
LINC00558-201ENST00000569422 SIGLEC11Q96RL6 698 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 MAPKAP1Q9BPZ7 522 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 PCBD2Q9H0N5 130 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 SFXN1Q9H9B4 322 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 FGF22Q9HCT0 170 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 SLC6A20Q9NP91 592 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 TBCCD1Q9NVR7 557 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 FTSJ1Q9UET6 329 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 OSGIN1Q9UJX0 560 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 ACSL5Q9ULC5 683 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 ENTPD4Q9Y227 616 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 NTNG1Q9Y2I2 539 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 FAM221AA4D161 298 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 SOBPA7XYQ1 873 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 CACNB4O00305 520 aaPredicted RBP8.25□□□□□ -1.09
LINC00558-201ENST00000569422 CTDSP2O14595 271 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 DPM1O60762 260 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 AIFM1O95831 613 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 LIMS1P48059 325 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 LBX1P52954 281 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 CEP78Q5JTW2 689 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 C6orf132Q5T0Z8 1188 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 LIN54Q6MZP7 749 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 NIPAL1Q6NVV3 410 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 PGBD2Q6P3X8 592 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 USP43Q70EL4 1123 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 VRK2Q86Y07 508 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 KRT73Q86Y46 540 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 AMER2Q8N7J2 671 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 OR4K5Q8NGD3 323 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 SLC22A8Q8TCC7 542 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 SLC9A6Q92581 669 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 FCGR1BQ92637 280 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 HPS1Q92902 700 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 MYADMQ96S97 322 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 GPA33Q99795 319 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 FAIM2Q9BWQ8 316 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 TEX101Q9BY14 249 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 EGLN3Q9H6Z9 239 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 PALMDQ9NP74 551 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 A4GALTQ9NPC4 353 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 WBP1LQ9NX94 342 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 CNIH4Q9P003 139 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 MALT1Q9UDY8 824 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 SLC13A4Q9UKG4 626 aa8.25□□□□□ -1.09
LINC00558-201ENST00000569422 HELZP42694 1942 aaKnown RBP8.25□□□□□ -1.09
LINC00558-201ENST00000569422 STMND1H3BQB6 276 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 PDE9AO76083 593 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 ASGR2P07307 311 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 HIST1H1TP22492 207 aaPredicted RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 CD40LGP29965 261 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 EIF2B2P49770 351 aaKnown RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 HMGA2P52926 109 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 PPP2CBP62714 309 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 PPP2CAP67775 309 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 GINS1Q14691 196 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 OXA1LQ15070 435 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF770Q6IQ21 691 aaPredicted RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 FAM26EQ8N5C1 309 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 LCN9Q8WX39 176 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 MS4A6EQ96DS6 147 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 CEP19Q96LK0 163 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 NEURL2Q9BR09 285 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 TSSK6Q9BXA6 273 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 NUAK2Q9H093 628 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 MTIF3Q9H2K0 278 aaKnown RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 PLCXD1Q9NUJ7 323 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 C14orf119Q9NWQ9 140 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 MKLN1Q9UL63 735 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 YBX2Q9Y2T7 364 aaKnown RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 TRIOO75962 3097 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 A0A0A6YYD5 115 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 PRKYO43930 277 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 OR5F1O95221 314 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 PRKACBP22694 351 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 MMP11P24347 488 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 IGFALSP35858 605 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 TAS2R41P59536 307 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 TFF2Q03403 129 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 CHRNEQ04844 493 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 RPE65Q16518 533 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 SNAPC1Q16533 368 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 LIPKQ5VXJ0 399 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 PLAG1Q6DJT9 500 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 ACSM5Q6NUN0 579 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 RRM2BQ7LG56 351 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 OR2L3Q8NG85 312 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 PHOSPHO2Q8TCD6 241 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 CDADC1Q9BWV3 514 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 POLR2J2Q9GZM3 115 aaKnown RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 DDX31Q9H8H2 851 aaKnown RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 SNTG1Q9NSN8 517 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 ERVK13-1Q9NX77 482 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 REV1Q9UBZ9 1251 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 TBC1D29Q9UFV1 150 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms