RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 ITPAQ9BY32 194 aa11.13□□□□□ -0.63
FANCA-231ENST00000568626 ACTRT3Q9BYD9 372 aa11.13□□□□□ -0.63
FANCA-231ENST00000568626 TPT1P8Q9HAU6 139 aa11.13□□□□□ -0.63
FANCA-231ENST00000568626 GPATCH2Q9NW75 528 aa11.13□□□□□ -0.63
FANCA-231ENST00000568626 NDE1Q9NXR1 346 aa11.13□□□□□ -0.63
FANCA-231ENST00000568626 GPR83Q9NYM4 423 aa11.13□□□□□ -0.63
FANCA-231ENST00000568626 MYOTQ9UBF9 498 aa11.13□□□□□ -0.63
FANCA-231ENST00000568626 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.13□□□□□ -0.63
FANCA-231ENST00000568626 ERVK-11Q9UQG0 969 aa11.13□□□□□ -0.63
FANCA-231ENST00000568626 PCDHGA9Q9Y5G4 932 aaKnown RBP11.13□□□□□ -0.63
FANCA-231ENST00000568626 EVPLLA8MZ36 301 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 ALOX5P09917 674 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 DRD5P21918 477 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 CALB2P22676 271 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 SOX11P35716 441 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 TMED10P49755 219 aaKnown RBP11.12□□□□□ -0.63
FANCA-231ENST00000568626 NUDT2P50583 147 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 ART3Q13508 389 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 LASP1Q14847 261 aaKnown RBP11.12□□□□□ -0.63
FANCA-231ENST00000568626 EXOSC6Q5RKV6 272 aaKnown RBP11.12□□□□□ -0.63
FANCA-231ENST00000568626 ABHD17BQ5VST6 288 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 AGAP7PQ5VUJ5 663 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 DLEU7Q6UYE1 221 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 GPR155Q7Z3F1 870 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 DND1Q8IYX4 353 aaKnown RBP11.12□□□□□ -0.63
FANCA-231ENST00000568626 SLC15A4Q8N697 577 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 SIMC1Q8NDZ2 872 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 OR52N2Q8NGI0 321 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 PSMF1Q92530 271 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 JADE3Q92613 823 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 ADIPOR1Q96A54 375 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 LRRC58Q96CX6 371 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 ANKRD27Q96NW4 1050 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 AGAP4Q96P64 663 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 CGREF1Q99674 301 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 NPAS2Q99743 824 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 EPS8L2Q9H6S3 715 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 ANKRA2Q9H9E1 313 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 Q9N2J8 555 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 EQTNQ9NQ60 294 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 DUSP22Q9NRW4 184 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 THUMPD1Q9NXG2 353 aaKnown RBP11.12□□□□□ -0.63
FANCA-231ENST00000568626 VAPAQ9P0L0 249 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 MRTO4Q9UKD2 239 aaKnown RBP11.12□□□□□ -0.63
FANCA-231ENST00000568626 AP3M1Q9Y2T2 418 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 GPR55Q9Y2T6 319 aaPredicted RBP11.12□□□□□ -0.63
FANCA-231ENST00000568626 YARS2Q9Y2Z4 477 aaKnown RBP11.12□□□□□ -0.63
FANCA-231ENST00000568626 PCDHB14Q9Y5E9 798 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 PCDHGB7Q9Y5F8 929 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 PCDHGB3Q9Y5G1 929 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 FASNP49327 2511 aaKnown RBP11.12□□□□□ -0.63
FANCA-231ENST00000568626 CPAMD8Q8IZJ3 1885 aa11.12□□□□□ -0.63
FANCA-231ENST00000568626 CCT8L1PA6NM43 557 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 A8MUI8 341 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 MKRN2OSH3BPM6 223 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 FXYD1O00168 92 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 MASP2O00187 686 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 CLIC1O00299 241 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 AIM2O14862 343 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 TO15178 435 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 PRKNO60260 465 aaPredicted RBP11.11□□□□□ -0.63
FANCA-231ENST00000568626 DNAJB5O75953 348 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 NKX2-2O95096 273 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 AK1P00568 194 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 CT45A8P0DMV1 189 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 CT45A9P0DMV2 189 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 ESRRAP11474 423 aaPredicted RBP11.11□□□□□ -0.63
FANCA-231ENST00000568626 MATN1P21941 496 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 CASRP41180 1078 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 MAP3K8P41279 467 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 MLF1P58340 268 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 PSG6Q00889 435 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 MFAP5Q13361 173 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 TBR1Q16650 682 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 GTDC1Q4AE62 458 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 CYP27C1Q4G0S4 372 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 CT45A2Q5DJT8 189 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 ACER2Q5QJU3 275 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 TCTN3Q6NUS6 607 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 ISLR2Q6UXK2 745 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 RNF130Q86XS8 419 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 HPS6Q86YV9 775 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 MSRB3Q8IXL7 192 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 GPALPP1Q8IXQ4 340 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 SIRT6Q8N6T7 355 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 OR8J3Q8NGG0 315 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 ADAMTS15Q8TE58 950 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 TM9SF4Q92544 642 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 NSL1Q96IY1 281 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 HOPXQ9BPY8 73 aaPredicted RBP11.11□□□□□ -0.63
FANCA-231ENST00000568626 CPPED1Q9BRF8 314 aaPredicted RBP11.11□□□□□ -0.63
FANCA-231ENST00000568626 RNF32Q9H0A6 362 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 PIGUQ9H490 435 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 PRORYQ9H606 182 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 SLC6A13Q9NSD5 602 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 EXD2Q9NVH0 621 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 ARL8BQ9NVJ2 186 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 SLC25A37Q9NYZ2 338 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 SLAMF8Q9P0V8 285 aa11.11□□□□□ -0.63
FANCA-231ENST00000568626 MAP10Q9P2G4 905 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms