RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 CIDECQ96AQ7 238 aaPredicted RBP11.97□□□□□ -0.49
CLK3-224ENST00000568605 ELP4Q96EB1 424 aa11.97□□□□□ -0.49
CLK3-224ENST00000568605 MAGED4Q96JG8 741 aa11.97□□□□□ -0.49
CLK3-224ENST00000568605 ZNF597Q96LX8 424 aa11.97□□□□□ -0.49
CLK3-224ENST00000568605 C7orf26Q96N11 449 aa11.97□□□□□ -0.49
CLK3-224ENST00000568605 GPR137Q96N19 417 aa11.97□□□□□ -0.49
CLK3-224ENST00000568605 MS4A4EQ96PG1 132 aa11.97□□□□□ -0.49
CLK3-224ENST00000568605 DPY30Q9C005 99 aa11.97□□□□□ -0.49
CLK3-224ENST00000568605 BHLHE41Q9C0J9 482 aaPredicted RBP11.97□□□□□ -0.49
CLK3-224ENST00000568605 B4GALT7Q9UBV7 327 aa11.97□□□□□ -0.49
CLK3-224ENST00000568605 MRTO4Q9UKD2 239 aaKnown RBP11.97□□□□□ -0.49
CLK3-224ENST00000568605 C19orf53Q9UNZ5 99 aaPredicted RBP11.97□□□□□ -0.49
CLK3-224ENST00000568605 OR10H1Q9Y4A9 318 aa11.97□□□□□ -0.49
CLK3-224ENST00000568605 DOPEY2Q9Y3R5 2298 aa11.97□□□□□ -0.49
CLK3-224ENST00000568605 SDHDO14521 159 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 TO15178 435 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 UNC5CO95185 931 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 CCL3P10147 92 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 G6PDP11413 515 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 CNR1P21554 472 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 IL12BP29460 328 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 PSMD4P55036 377 aaKnown RBP11.96□□□□□ -0.49
CLK3-224ENST00000568605 CASP6P55212 293 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 CLDN8P56748 225 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 DUSP8Q13202 625 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 LSM12Q3MHD2 195 aaKnown RBP11.96□□□□□ -0.49
CLK3-224ENST00000568605 PAOXQ6QHF9 649 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 ZNF551Q7Z340 670 aaPredicted RBP11.96□□□□□ -0.49
CLK3-224ENST00000568605 WDR75Q8IWA0 830 aaKnown RBP11.96□□□□□ -0.49
CLK3-224ENST00000568605 GHDCQ8N2G8 530 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 OR10G3Q8NGC4 313 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 OR5M3Q8NGP4 307 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 PRR7Q8TB68 274 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 MOAP1Q96BY2 351 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 OMA1Q96E52 524 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 DTNBP1Q96EV8 351 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 VSTM2LQ96N03 204 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 DOHHQ9BU89 302 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 DUSP26Q9BV47 211 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 Q9N2J8 555 aa11.96□□□□□ -0.49
CLK3-224ENST00000568605 GPR55Q9Y2T6 319 aaPredicted RBP11.96□□□□□ -0.49
CLK3-224ENST00000568605 MYO7BQ6PIF6 2116 aa11.96□□□□□ -0.5
CLK3-224ENST00000568605 A0A1W2PRB8 838 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 OR6C70A6NIJ9 312 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 NPIPA5E9PKD4 350 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 UPK1AO00322 258 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 SASH3O75995 380 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 AGFG2O95081 481 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 PSMG1O95456 288 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 MST1P26927 711 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 MASP1P48740 699 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 DNASE1L1P49184 302 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 PER3P56645 1201 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 FBXW4P57775 412 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 EFR3AQ14156 821 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 PRSS53Q2L4Q9 553 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 PRAMEF20Q5VT98 475 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 NXNQ6DKJ4 435 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 LARP4Q71RC2 724 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLK3-224ENST00000568605 NUP54Q7Z3B4 507 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 SPATA19Q7Z5L4 167 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 CAMKMTQ7Z624 323 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 PRR22Q8IZ63 422 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 FAM26EQ8N5C1 309 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 ARFGAP2Q8N6H7 521 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 VPS37AQ8NEZ2 397 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 OR7A2PQ8NGA2 310 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 SPPL2AQ8TCT8 520 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 TMCO6Q96DC7 493 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 ZBTB18Q99592 522 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 TTTY12Q9BZ98 90 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 TSPAN10Q9H1Z9 355 aaPredicted RBP11.95□□□□□ -0.5
CLK3-224ENST00000568605 METTL7AQ9H8H3 244 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 ANKRA2Q9H9E1 313 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 IL1RL2Q9HB29 575 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 SH2D2AQ9NP31 389 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 DEPPQ9NTK1 212 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 KLRF1Q9NZS2 232 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 NPIPA1Q9UND3 350 aa11.95□□□□□ -0.5
CLK3-224ENST00000568605 CHCHD2Q9Y6H1 151 aaPredicted RBP11.95□□□□□ -0.5
CLK3-224ENST00000568605 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.95□□□□□ -0.5
CLK3-224ENST00000568605 LRRK2Q5S007 2527 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 GOLGA8QA0A0J9YX86 632 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 GOLGA8OA6NCC3 632 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 ANKRD33BA6NCL7 494 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 GOLGA8NF8WBI6 632 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 G3V3Y1 287 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 CFLARO15519 480 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 EMC8O43402 210 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 HS6ST1O60243 411 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 REM1O75628 298 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 SNX4O95219 450 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 KRT16P08779 473 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 CT45A8P0DMV1 189 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 CT45A9P0DMV2 189 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 LAMP1P11279 417 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 ABOP16442 354 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 SOX18P35713 384 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 RFC3P40938 356 aa11.94□□□□□ -0.5
CLK3-224ENST00000568605 KIR3DL1P43629 444 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms