RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 A8MVJ9 347 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 KLRC4-KLRK1H3BQV0 150 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 PGRMC2O15173 223 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 GSC2O15499 205 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 ERN1O75460 977 aaKnown RBP12.44□□□□□ -0.42
CLK3-218ENST00000566926 NQO1P15559 274 aaKnown RBP12.44□□□□□ -0.42
CLK3-218ENST00000566926 PORP16435 677 aaPredicted RBP12.44□□□□□ -0.42
CLK3-218ENST00000566926 TACR1P25103 407 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 ZFP36L2P47974 494 aaKnown RBP12.44□□□□□ -0.42
CLK3-218ENST00000566926 XKP51811 444 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 MRPL49Q13405 166 aaKnown RBP12.44□□□□□ -0.42
CLK3-218ENST00000566926 PDE7AQ13946 482 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 ZNF267Q14586 743 aaPredicted RBP12.44□□□□□ -0.42
CLK3-218ENST00000566926 MPEG1Q2M385 716 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 EIF2S3LQ2VIR3 472 aaKnown RBP12.44□□□□□ -0.42
CLK3-218ENST00000566926 ZNF324BQ6AW86 544 aaPredicted RBP12.44□□□□□ -0.42
CLK3-218ENST00000566926 FAM71E1Q6IPT2 247 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 SLC48A1Q6P1K1 146 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 OPN5Q6U736 354 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 RNF111Q6ZNA4 994 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 RINLQ6ZS11 566 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 SLC29A4Q7RTT9 530 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 GALNTL5Q7Z4T8 443 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 NUBPLQ8TB37 319 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 C16orf78Q8WTQ4 265 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 TM4SF18Q96CE8 201 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 ITCHQ96J02 903 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 OR52E6Q96RD3 313 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 TAAR6Q96RI8 345 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 SH3GL1Q99961 368 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 SLX1AQ9BQ83 275 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 CNPPD1Q9BV87 410 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 BHLHE41Q9C0J9 482 aaPredicted RBP12.44□□□□□ -0.42
CLK3-218ENST00000566926 SPAG4Q9NPE6 437 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 TIMMDC1Q9NPL8 285 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 MIEF1Q9NQG6 463 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 HPF1Q9NWY4 346 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 BAIAP2L1Q9UHR4 511 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 ATP6V1HQ9UI12 483 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 ERVK-11Q9UQG0 969 aa12.44□□□□□ -0.42
CLK3-218ENST00000566926 SPENQ96T58 3664 aaKnown RBP12.43□□□□□ -0.42
CLK3-218ENST00000566926 CLEC18AA5D8T8 446 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 ASPDHA6ND91 283 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 H0YHG0 523 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 FBP2O00757 339 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 PRKNO60260 465 aaPredicted RBP12.43□□□□□ -0.42
CLK3-218ENST00000566926 NME2P1O60361 137 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 DNAJA2O60884 412 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 OR2J2O76002 312 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 KCNH1O95259 989 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 IGKV3-11P04433 115 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 DDCP20711 480 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 NME2P22392 152 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 IL12AP29459 219 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 PGM1P36871 562 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 TRPC1P48995 793 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 NFYCQ13952 458 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 SPANXN4Q5MJ08 99 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 ZNF468Q5VIY5 522 aaPredicted RBP12.43□□□□□ -0.42
CLK3-218ENST00000566926 CLEC18BQ6UXF7 455 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 BNC2Q6ZN30 1099 aaPredicted RBP12.43□□□□□ -0.42
CLK3-218ENST00000566926 GALNT12Q8IXK2 581 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 SAMD14Q8IZD0 417 aaPredicted RBP12.43□□□□□ -0.42
CLK3-218ENST00000566926 DEFB107AQ8IZN7 70 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 SLC15A4Q8N697 577 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 KRTCAP2Q8N6L1 136 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 POGLUT1Q8NBL1 392 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 CLEC18CQ8NCF0 446 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 SLC22A8Q8TCC7 542 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 PPCDCQ96CD2 204 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 COQ8BQ96D53 544 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 RASL10BQ96S79 203 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 ERVK-19Q9WJR5 959 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 ZNF780BQ9Y6R6 833 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 DNAJC13O75165 2243 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 LRRK2Q5S007 2527 aa12.43□□□□□ -0.42
CLK3-218ENST00000566926 SPTBN1Q01082 2364 aaKnown RBP12.42□□□□□ -0.42
CLK3-218ENST00000566926 PRSS51A0A1B0GVH4 220 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 TMEM200CA6NKL6 621 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 WASHC1A8K0Z3 465 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 WWP2O00308 870 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 RNASET2O00584 256 aaKnown RBP12.42□□□□□ -0.42
CLK3-218ENST00000566926 ERAL1O75616 437 aaKnown RBP12.42□□□□□ -0.42
CLK3-218ENST00000566926 AGFG2O95081 481 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 ZIC2O95409 532 aaPredicted RBP12.42□□□□□ -0.42
CLK3-218ENST00000566926 CPMP14384 443 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 CSNK2A2P19784 350 aaPredicted RBP12.42□□□□□ -0.42
CLK3-218ENST00000566926 NT5EP21589 574 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 ALDH9A1P49189 494 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 ST13P50502 369 aaKnown RBP12.42□□□□□ -0.42
CLK3-218ENST00000566926 SLC25A3Q00325 362 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 ALDH6A1Q02252 535 aaKnown RBP12.42□□□□□ -0.42
CLK3-218ENST00000566926 RBPJQ06330 500 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 C2orf80Q0P641 193 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 KRTCAP3Q53RY4 240 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 PIGGQ5H8A4 983 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 DND1Q8IYX4 353 aaKnown RBP12.42□□□□□ -0.42
CLK3-218ENST00000566926 ZNF321PQ8N8H1 164 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 CLHC1Q8NHS4 586 aa12.42□□□□□ -0.42
CLK3-218ENST00000566926 CDC26Q8NHZ8 85 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms