RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 SLC9A6Q92581 669 aa14.78□□□□□ -0.04
COMMD4-215ENST00000566843 LMLNQ96KR4 655 aa14.78□□□□□ -0.04
COMMD4-215ENST00000566843 FOPNLQ96NB1 174 aa14.78□□□□□ -0.04
COMMD4-215ENST00000566843 C17orf62Q9BQA9 187 aa14.78□□□□□ -0.04
COMMD4-215ENST00000566843 SAP130Q9H0E3 1048 aa14.78□□□□□ -0.04
COMMD4-215ENST00000566843 HDHD2Q9H0R4 259 aa14.78□□□□□ -0.04
COMMD4-215ENST00000566843 CYSLTR2Q9NS75 346 aa14.78□□□□□ -0.04
COMMD4-215ENST00000566843 EXTL2Q9UBQ6 330 aa14.78□□□□□ -0.04
COMMD4-215ENST00000566843 STON1Q9Y6Q2 735 aa14.78□□□□□ -0.04
COMMD4-215ENST00000566843 LANCL1O43813 399 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 C1orf105O95561 183 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 POP4O95707 220 aaKnown RBP14.77□□□□□ -0.04
COMMD4-215ENST00000566843 DHFRP00374 187 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 PAHP00439 452 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 DDCP20711 480 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 STOMP27105 288 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 PRLHRP49683 370 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 TAP2Q03519 686 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 MFSD13AQ14CX5 517 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 TAF12Q16514 161 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 ZNF284Q2VY69 593 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 ARHGAP15Q53QZ3 475 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 EOGTQ5NDL2 527 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 VASNQ6EMK4 673 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 NXPE4Q6UWF7 544 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 ADGRF3Q8IZF5 1079 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 TRAM1L1Q8N609 369 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 RASGEF1AQ8N9B8 481 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 OR5M3Q8NGP4 307 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 TMED9Q9BVK6 235 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 ZDHHC6Q9H6R6 413 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 SIRT3Q9NTG7 399 aaPredicted RBP14.77□□□□□ -0.04
COMMD4-215ENST00000566843 HS3ST2Q9Y278 367 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 YIPF1Q9Y548 306 aa14.77□□□□□ -0.04
COMMD4-215ENST00000566843 RPS10-NUDT3A0A1W2PQS6 291 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 ATG13O75143 517 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 UBXN7O94888 489 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 OLFM2O95897 454 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 EFEMP2O95967 443 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 RFX3P48380 749 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 LBX1P52954 281 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 LSM11P83369 360 aaKnown RBP eCLIP14.77□□□□□ -0.05
COMMD4-215ENST00000566843 CSTF1Q05048 431 aaKnown RBP14.77□□□□□ -0.05
COMMD4-215ENST00000566843 RIPPLY1Q0D2K3 151 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 CNTN1Q12860 1018 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 CD276Q5ZPR3 534 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 GPR139Q6DWJ6 353 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 SLC27A4Q6P1M0 643 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 TMEM91Q6ZNR0 172 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 SHFQ7M4L6 423 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 LHFPL3Q86UP9 236 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 GPALPP1Q8IXQ4 340 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 OR8H3Q8N146 312 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 CPXM2Q8N436 756 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 ZNF655Q8N720 491 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-215ENST00000566843 HGDQ93099 445 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 RFT1Q96AA3 541 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 PHF21AQ96BD5 680 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 CCDC120Q96HB5 630 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 THAP7Q9BT49 309 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-215ENST00000566843 TBC1D17Q9HA65 648 aa14.77□□□□□ -0.05
COMMD4-215ENST00000566843 NFKBIL1Q9UBC1 381 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-215ENST00000566843 EXOGQ9Y2C4 368 aaKnown RBP14.77□□□□□ -0.05
COMMD4-215ENST00000566843 PRAMEF27A3QJZ7 478 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 M0R3H8 397 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 CHST10O43529 356 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 EFCAB14O75071 495 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 ABLIM3O94929 683 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 TFPIP10646 304 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 ANXA3P12429 323 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 ENPP1P22413 925 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 FRKP42685 505 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-215ENST00000566843 CLLU1Q5K131 121 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 HENMT1Q5T8I9 393 aaKnown RBP14.76□□□□□ -0.05
COMMD4-215ENST00000566843 BCL2L15Q5TBC7 163 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 HACD4Q5VWC8 232 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 RAET1GQ6H3X3 334 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 SLC9B2Q86UD5 537 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 TIGD4Q8IY51 512 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 ARL14EPQ8N8R7 260 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-215ENST00000566843 SLC43A3Q8NBI5 491 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 OR11H4Q8NGC9 324 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 OR8D4Q8NGM9 314 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 OR52N1Q8NH53 320 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 TEX47Q8TBZ9 253 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 SLC5A11Q8WWX8 675 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 TREX2Q9BQ50 279 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-215ENST00000566843 SORBS1Q9BX66 1292 aaKnown RBP14.76□□□□□ -0.05
COMMD4-215ENST00000566843 SERHL2Q9H4I8 314 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 NEUROD4Q9HD90 331 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 CUEDC1Q9NWM3 386 aaPredicted RBP14.76□□□□□ -0.05
COMMD4-215ENST00000566843 SLC28A2O43868 658 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 BNIP3LO60238 219 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 SCO1O75880 301 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 IGHA1P01876 353 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 AHCYP23526 432 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 PDHA2P29803 388 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 VIPR1P32241 457 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 MTNR1BP49286 362 aa14.76□□□□□ -0.05
COMMD4-215ENST00000566843 MANFP55145 182 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms