RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 USH1CQ9Y6N9 552 aa12.74□□□□□ -0.37
HERPUD1-210ENST00000565966 FLNBO75369 2602 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 A0A087WV62 115 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 TP53I11O14683 189 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 TFECO14948 347 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 ALDOCP09972 364 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 CCL3P10147 92 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 LAMP1P11279 417 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 DDX5P17844 614 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 EFNA1P20827 205 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 PRPS1L1P21108 318 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 RFC3P40938 356 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 TMED10P49755 219 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 MANFP55145 182 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 HSPB3Q12988 150 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.73□□□□□ -0.375e-6■■□□□ 11.7
HERPUD1-210ENST00000565966 C4orf17Q53FE4 359 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 HSP90B2PQ58FF3 399 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 TMEM107Q6UX40 140 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 RGS9BPQ6ZS82 235 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 GK5Q6ZS86 529 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 SPATA19Q7Z5L4 167 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 GHDCQ8N2G8 530 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 OR2L13Q8N349 312 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 ZFP28Q8NHY6 868 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 SSC4DQ8WTU2 575 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 ELP4Q96EB1 424 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 HSPBAP1Q96EW2 488 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 LCORQ96JN0 433 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 NXF5Q9H1B4 397 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 MED4Q9NPJ6 270 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 CNIH4Q9P003 139 aa12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 ERRFI1Q9UJM3 462 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 C19orf53Q9UNZ5 99 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-210ENST00000565966 A0A1B0GUH1 482 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 PINLYPA6NC86 204 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 G3V3Y1 287 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 ACOT7O00154 380 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 UPK1AO00322 258 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 ANKRD28O15084 1053 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 ACOX3O15254 700 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 HS6ST1O60243 411 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 NME6O75414 186 aaPredicted RBP12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 PSMG1O95456 288 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 IFI6P09912 130 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 NAGAP17050 411 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 DRD5P21918 477 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 PPICP45877 212 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 DNASE1L1P49184 302 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 CDK9P50750 372 aaKnown RBP12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 PLGLB1Q02325 96 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 CPTPQ5TA50 214 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 NXNQ6DKJ4 435 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 EPGNQ6UW88 154 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 TMEM64Q6YI46 380 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 CAMKMTQ7Z624 323 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 FBXW8Q8N3Y1 598 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 FAM13CQ8NE31 585 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 OR10G3Q8NGC4 313 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 ACTRT2Q8TDY3 377 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 OR52B2Q96RD2 323 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 PRPF18Q99633 342 aaKnown RBP12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 DPY30Q9C005 99 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 FOLH1BQ9HBA9 442 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 ATAD3AQ9NVI7 634 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 AIG1Q9NVV5 245 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 TAS2R9Q9NYW1 312 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 MAPRE3Q9UPY8 281 aa12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 GPR55Q9Y2T6 319 aaPredicted RBP12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 CHCHD2Q9Y6H1 151 aaPredicted RBP12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 SPTAN1Q13813 2472 aaKnown RBP12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 USP9YO00507 2555 aaPredicted RBP12.72□□□□□ -0.37
HERPUD1-210ENST00000565966 A0A0G2JMM0 328 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 A0A1W2PPB8 328 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 A0A1W2PRB8 838 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 A0A1W2PRS3 328 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 WIPF3A6NGB9 483 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 KIR3DP1A8MWS1 328 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 LRRTM2O43300 516 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 DIAPH2O60879 1101 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 COQ9O75208 318 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 ABCD3P28288 659 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 GPC1P35052 558 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 PIGAP37287 484 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 FBXW4P57775 412 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 PPIAP62937 165 aaKnown RBP12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 RPP38P78345 283 aaKnown RBP12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 MLC1Q15049 377 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 RPS6KA2Q15349 733 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 NNATQ16517 81 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 TBCELQ5QJ74 424 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 TMEM198Q66K66 360 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 PAOXQ6QHF9 649 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 SLC22A16Q86VW1 577 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 SPPL2CQ8IUH8 684 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 PRR22Q8IZ63 422 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 ARFGAP2Q8N6H7 521 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 NATD1Q8N6N6 113 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 OR52N2Q8NGI0 321 aa12.71□□□□□ -0.37
HERPUD1-210ENST00000565966 OR5M3Q8NGP4 307 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms