RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CAMKMTQ7Z624 323 aa19.33■□□□□ 0.68
MAP1LC3B-206ENST00000564844 GRAMD2AQ8IUY3 354 aa19.33■□□□□ 0.68
MAP1LC3B-206ENST00000564844 RIT1Q92963 219 aa19.33■□□□□ 0.68
MAP1LC3B-206ENST00000564844 FCRL4Q96PJ5 515 aa19.33■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SECISBP2Q96T21 854 aaKnown RBP19.33■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ZSCAN32Q9NX65 697 aa19.33■□□□□ 0.68
MAP1LC3B-206ENST00000564844 DYRK1BQ9Y463 629 aa19.33■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PROM1O43490 865 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SLC43A1O75387 559 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 CFDP00746 253 aaPredicted RBP19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SLC16A1P53985 500 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 CDH11P55287 796 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 CRYZQ08257 329 aaKnown RBP19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SF3A2Q15428 464 aaKnown RBP19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TMEM201Q5SNT2 666 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 GPR135Q8IZ08 494 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 GALNT11Q8NCW6 608 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TMEM169Q96HH4 297 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ZNF334Q9HCZ1 680 aaPredicted RBP19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 CACNA1CQ13936 2221 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SZT2Q5T011 3432 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 CPSF4LA6NMK7 179 aaKnown RBP19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 HMGN4O00479 90 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 EIF4EP06730 217 aaKnown RBP19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SHC1P29353 583 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 STXBP1P61764 594 aaKnown RBP19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 CAP1Q01518 475 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 NTRK2Q16620 822 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 CST9Q5W186 159 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TIGD3Q6B0B8 471 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 IDO2Q6ZQW0 420 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 FAM26EQ8N5C1 309 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 OR51G2Q8NGK0 314 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 GOT1L1Q8NHS2 421 aaPredicted RBP19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 APOBEC4Q8WW27 367 aaKnown RBP19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PDXPQ96GD0 296 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 MED20Q9H944 212 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PCDHGB7Q9Y5F8 929 aa19.32■□□□□ 0.68
MAP1LC3B-206ENST00000564844 IGLV3-16A0A075B6K0 115 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ADAMTS4O75173 837 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 HSD3B1P14060 373 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SP140Q13342 867 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TCEA2Q15560 299 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SMARCD3Q6STE5 483 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TRAPPC5Q8IUR0 188 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ZG16BQ96DA0 208 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 EQTNQ9NQ60 294 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 YIPF1Q9Y548 306 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 UGDHO60701 494 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 UQCRC2P22695 453 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 GIFP27352 417 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 HLA-FP30511 346 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 GABRA5P31644 462 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SLC1A3P43003 542 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ADAM15Q13444 863 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 OCLNQ16625 522 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TRIM71Q2Q1W2 868 aaKnown RBP19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ZNF750Q32MQ0 723 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 PRICKLE2Q7Z3G6 844 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 IZUMO1Q8IYV9 350 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 AMER3Q8N944 861 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 DNAJA4Q8WW22 397 aaPredicted RBP19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 HMGB4Q8WW32 186 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 VOPP1Q96AW1 172 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 FOPNLQ96NB1 174 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 CASD1Q96PB1 797 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TEFMQ96QE5 360 aaKnown RBP19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 POLDIP3Q9BY77 421 aaKnown RBP19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 H7C4K7 107 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 NPC1O15118 1278 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SEC14L5O43304 696 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TSPAN9O75954 239 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SLCO2B1O94956 709 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 GPR4P46093 362 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 COX10Q12887 443 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ADGRD2Q7Z7M1 963 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TMEM150AQ86TG1 271 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 C17orf62Q9BQA9 187 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SERHL2Q9H4I8 314 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ZFP64Q9NPA5 681 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 B3GNT2Q9NY97 397 aa19.31■□□□□ 0.68
MAP1LC3B-206ENST00000564844 A8MVJ9 347 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 NRG2O14511 850 aaPredicted RBP19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 GNSP15586 552 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TPBGQ13641 420 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ZMYND11Q15326 602 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 C22orf39Q6P5X5 142 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ADGRF3Q8IZF5 1079 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TEX47Q8TBZ9 253 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 CYB5D2Q8WUJ1 264 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ZNF354BQ96LW1 612 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SOCS6O14544 535 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ACP2P11117 423 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 AP2S1P53680 142 aaPredicted RBP19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 EPHA5P54756 1037 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 GAS1P54826 345 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 TMEM115Q12893 351 aaPredicted RBP19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 SUZ12Q15022 739 aaKnown RBP19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 ARHGEF6Q15052 776 aa19.3■□□□□ 0.68
MAP1LC3B-206ENST00000564844 HIST2H2AA3Q6FI13 130 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms