RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 USH1CQ9Y6N9 552 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 ZMYM6O95789 1325 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 ALPK3Q96L96 1907 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 ZNF318Q5VUA4 2279 aa3.36□□□□□ -1.87
CHD9-212ENST00000564641 PLXNA1Q9UIW2 1896 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 MYH7P12883 1935 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 RLFQ13129 1914 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 IGHV4-30-2A0A087WSY4 118 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 SRRM5B3KS81 715 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 MEIS2O14770 477 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 PHOX2AO14813 284 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 ATP9AO75110 1047 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 POP4O95707 220 aaKnown RBP3.35□□□□□ -1.87
CHD9-212ENST00000564641 IGHV2-70P01814 119 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 MT-ND3P03897 115 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 KRT16P08779 473 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 HAPLN1P10915 354 aaPredicted RBP3.35□□□□□ -1.87
CHD9-212ENST00000564641 PCP11498 1178 aaKnown RBP3.35□□□□□ -1.87
CHD9-212ENST00000564641 PRG2P13727 222 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 ZNF18P17022 549 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 TCP1P17987 556 aaKnown RBP3.35□□□□□ -1.87
CHD9-212ENST00000564641 S100A1P23297 94 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 RFC2P35250 354 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 HSPA9P38646 679 aaKnown RBP3.35□□□□□ -1.87
CHD9-212ENST00000564641 VHLP40337 213 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 SLC1A4P43007 532 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 LHX1P48742 406 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 SERPINB8P50452 374 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 ARPC4P59998 168 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 KRTAP10-8P60410 259 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 NCALDP61601 193 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 KCNJ2P63252 427 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 MZT1Q08AG7 82 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 RCN2Q14257 317 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 CCL14Q16627 93 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 CCDC153Q494R4 210 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 TXNRD3NBQ6F5E7 133 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 SNRNP48Q6IEG0 339 aaKnown RBP3.35□□□□□ -1.87
CHD9-212ENST00000564641 ZBTB49Q6ZSB9 765 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 KCNMB4Q86W47 210 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 FAM131BQ86XD5 332 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 PEX5LQ8IYB4 626 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 LRRC34Q8IZ02 419 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 LRRC43Q8N309 656 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 KLHDC1Q8N7A1 406 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 NHLRC2Q8NBF2 726 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 MGARPQ8TDB4 240 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 BADQ92934 168 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 MOB3AQ96BX8 217 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 TCEANC2Q96MN5 208 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 OLFM3Q96PB7 478 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 CDX2Q99626 313 aaPredicted RBP3.35□□□□□ -1.87
CHD9-212ENST00000564641 MAP3K3Q99759 626 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 CPNE1Q99829 537 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 ATF6BQ99941 703 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 SIKE1Q9BRV8 207 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 TIPINQ9BVW5 301 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 KRT23Q9C075 422 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 ZNF350Q9GZX5 532 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 PARLQ9H300 379 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 TMEM206Q9H813 350 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 LMAN1LQ9HAT1 526 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 RNPEPL1Q9HAU8 725 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 POLD4Q9HCU8 107 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 KCNMB3Q9NPA1 279 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 FAM114A2Q9NRY5 505 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 SAMSN1Q9NSI8 373 aaKnown RBP3.35□□□□□ -1.87
CHD9-212ENST00000564641 CYP39A1Q9NYL5 469 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 GTSE1Q9NYZ3 720 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 NYAP2Q9P242 653 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 RABL2AQ9UBK7 228 aaPredicted RBP3.35□□□□□ -1.87
CHD9-212ENST00000564641 RNF14Q9UBS8 474 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 LNPEPQ9UIQ6 1025 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 SNX12Q9UMY4 172 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 ITM2BQ9Y287 266 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 Q9Y3F1 56 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 HYOU1Q9Y4L1 999 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 ZNF532Q9HCE3 1301 aa3.35□□□□□ -1.87
CHD9-212ENST00000564641 A0A0J9YVX5 310 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 CCDC162PA2VCL2 907 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SDR42E2A6NKP2 422 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 A8MUI8 341 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 F5H6K3 240 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SPECC1L-ADORA2AF8WAN1 911 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 NVLO15381 856 aaKnown RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 BIRC5O15392 142 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 TPBGLP0DKB5 382 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SMIM18P0DKX4 95 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SAGP10523 405 aaPredicted RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 GP9P14770 177 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 ACAT1P24752 427 aaKnown RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 MARCKSP29966 332 aaPredicted RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 SOAT1P35610 550 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 PRKCIP41743 596 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 FRKP42685 505 aaPredicted RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 TRPC1P48995 793 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 ACLYP53396 1101 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 MTTPP55157 894 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 MAGOHP61326 146 aaKnown RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 DYNLL1P63167 89 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms