RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 EMDP50402 254 aa13.59□□□□□ -0.23
SNX29-203ENST00000564111 PSMD4P55036 377 aaKnown RBP13.59□□□□□ -0.23
SNX29-203ENST00000564111 SLC25A35Q3KQZ1 300 aa13.59□□□□□ -0.23
SNX29-203ENST00000564111 NHSL2Q5HYW2 709 aa13.59□□□□□ -0.23
SNX29-203ENST00000564111 LRIG3Q6UXM1 1119 aa13.59□□□□□ -0.23
SNX29-203ENST00000564111 R3HCC1LQ7Z5L2 792 aaKnown RBP13.59□□□□□ -0.23
SNX29-203ENST00000564111 LILRB4Q8NHJ6 448 aa13.59□□□□□ -0.23
SNX29-203ENST00000564111 NTNG2Q96CW9 530 aa13.59□□□□□ -0.23
SNX29-203ENST00000564111 EBPLQ9BY08 206 aa13.59□□□□□ -0.23
SNX29-203ENST00000564111 PROK2Q9HC23 129 aa13.59□□□□□ -0.23
SNX29-203ENST00000564111 SSU72Q9NP77 194 aaKnown RBP13.59□□□□□ -0.23
SNX29-203ENST00000564111 MAPRE3Q9UPY8 281 aa13.59□□□□□ -0.23
SNX29-203ENST00000564111 A0A1W2PS29 197 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 SNPHO15079 494 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 SEC22BO75396 215 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 ERN1O75460 977 aaKnown RBP13.58□□□□□ -0.24
SNX29-203ENST00000564111 WISP2O76076 250 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 ACTL6AO96019 429 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 COL8A1P27658 744 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 CLK3P49761 638 aaKnown RBP13.58□□□□□ -0.24
SNX29-203ENST00000564111 PNLIPRP2P54317 469 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 ZNF155Q12901 538 aaPredicted RBP13.58□□□□□ -0.24
SNX29-203ENST00000564111 EXOSC7Q15024 291 aaKnown RBP13.58□□□□□ -0.24
SNX29-203ENST00000564111 CYP27C1Q4G0S4 372 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 HIST2H2BCQ6DN03 193 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 CCDC116Q8IYX3 515 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 CLYBLQ8N0X4 340 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 OR1J4Q8NGS1 313 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 OR9A2Q8NGT5 310 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 PPP3R2Q96LZ3 170 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 GATA5Q9BWX5 397 aaPredicted RBP13.58□□□□□ -0.24
SNX29-203ENST00000564111 FOLH1BQ9HBA9 442 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 SDHAF3Q9NRP4 125 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 KLRF1Q9NZS2 232 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 ABCG2Q9UNQ0 655 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 LIPGQ9Y5X9 500 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 ARHGAP21Q5T5U3 1957 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 HSPB2A8KAH6 182 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 TMEM114B3SHH9 223 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 HPCAL1P37235 193 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 NCBP2P52298 156 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNX29-203ENST00000564111 NUP107P57740 925 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 LTB4RQ15722 352 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 HSPB2Q16082 182 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 TIGD3Q6B0B8 471 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 ZNF585AQ6P3V2 769 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 MMP21Q8N119 569 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 CDC26Q8NHZ8 85 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNX29-203ENST00000564111 DOK4Q8TEW6 326 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 C14orf79Q96F83 325 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 KCNJ16Q9NPI9 418 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 PNPLA3Q9NST1 481 aa13.58□□□□□ -0.24
SNX29-203ENST00000564111 SPENQ96T58 3664 aaKnown RBP13.57□□□□□ -0.24
SNX29-203ENST00000564111 MAST4O15021 2626 aa13.57□□□□□ -0.24
SNX29-203ENST00000564111 PDPK1O15530 556 aa13.57□□□□□ -0.24
SNX29-203ENST00000564111 FOXA1P55317 472 aa13.57□□□□□ -0.24
SNX29-203ENST00000564111 EEF1A1P68104 462 aaKnown RBP13.57□□□□□ -0.24
SNX29-203ENST00000564111 DUSP8Q13202 625 aa13.57□□□□□ -0.24
SNX29-203ENST00000564111 TRMT12Q53H54 448 aaKnown RBP13.57□□□□□ -0.24
SNX29-203ENST00000564111 EEF1A1P5Q5VTE0 462 aa13.57□□□□□ -0.24
SNX29-203ENST00000564111 LACC1Q8IV20 430 aa13.57□□□□□ -0.24
SNX29-203ENST00000564111 CEP70Q8NHQ1 597 aa13.57□□□□□ -0.24
SNX29-203ENST00000564111 ZBED6CLQ96FA7 236 aaPredicted RBP13.57□□□□□ -0.24
SNX29-203ENST00000564111 VSTM2LQ96N03 204 aa13.57□□□□□ -0.24
SNX29-203ENST00000564111 C19orf53Q9UNZ5 99 aaPredicted RBP13.57□□□□□ -0.24
SNX29-203ENST00000564111 MRPS18CQ9Y3D5 142 aaKnown RBP13.57□□□□□ -0.24
SNX29-203ENST00000564111 OR10H1Q9Y4A9 318 aa13.57□□□□□ -0.24
SNX29-203ENST00000564111 CBR3O75828 277 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 SOX30O94993 753 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 MYZAPP0CAP1 466 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 PTPN6P29350 595 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 ALDH3A1P30838 453 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 LCN1P31025 176 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 VPS26BQ4G0F5 336 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 EMC4Q5J8M3 183 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 ANGPTL8Q6UXH0 198 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 MCEMP1Q8IX19 187 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 FAM111AQ96PZ2 611 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 TREX2Q9BQ50 279 aaPredicted RBP13.56□□□□□ -0.24
SNX29-203ENST00000564111 TTYH2Q9BSA4 534 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 OR2B2Q9GZK3 357 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 UBQLN3Q9H347 655 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 Q9N2J8 555 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 ACSS1Q9NUB1 689 aaPredicted RBP13.56□□□□□ -0.24
SNX29-203ENST00000564111 DDX18Q9NVP1 670 aaKnown RBP13.56□□□□□ -0.24
SNX29-203ENST00000564111 RNF6Q9Y252 685 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 POLR3HQ9Y535 204 aaPredicted RBP13.56□□□□□ -0.24
SNX29-203ENST00000564111 C15orf38-AP3S2A0A0A6YYH1 394 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 REM1O75628 298 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 HSPA4LO95757 839 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 ZFP36L2P47974 494 aaKnown RBP13.56□□□□□ -0.24
SNX29-203ENST00000564111 DUSP2Q05923 314 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 MAD2L1Q13257 205 aaPredicted RBP13.56□□□□□ -0.24
SNX29-203ENST00000564111 PRR22Q8IZ63 422 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 ACBD4Q8NC06 268 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 PPCDCQ96CD2 204 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 PRDM14Q9GZV8 571 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 REEP4Q9H6H4 257 aa13.56□□□□□ -0.24
SNX29-203ENST00000564111 DTX4Q9Y2E6 619 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms