RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 BATF3Q9NR55 127 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 GPATCH2Q9NW75 528 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 ADA2Q9NZK5 511 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 BCAP29Q9UHQ4 241 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 PPIEQ9UNP9 301 aaKnown RBP12.02□□□□□ -0.49
SPG7-209ENST00000564047 ERVK-19Q9WJR5 959 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 HS3ST3B1Q9Y662 390 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 IGHV3-20A0A0C4DH32 117 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 HRKO00198 91 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 RRP8O43159 456 aaKnown RBP12.01□□□□□ -0.49
SPG7-209ENST00000564047 PRAMEF2O60811 474 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 DDAH2O95865 285 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 IGKV3-11P04433 115 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 HMGN2P05204 90 aaKnown RBP12.01□□□□□ -0.49
SPG7-209ENST00000564047 PRIM2P49643 509 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 ANXA11P50995 505 aaKnown RBP12.01□□□□□ -0.49
SPG7-209ENST00000564047 RPS18P62269 152 aaKnown RBP12.01□□□□□ -0.49
SPG7-209ENST00000564047 LIPEQ05469 1076 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 EXOSC7Q15024 291 aaKnown RBP12.01□□□□□ -0.49
SPG7-209ENST00000564047 PIGGQ5H8A4 983 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 FAM69BQ5VUD6 431 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 MFSD12Q6NUT3 480 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 ZCCHC12Q6PEW1 402 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 PAPD4Q6PIY7 484 aaKnown RBP12.01□□□□□ -0.49
SPG7-209ENST00000564047 ANGPTL8Q6UXH0 198 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 SERPINA11Q86U17 422 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 RNF130Q86XS8 419 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 ZNF615Q8N8J6 731 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 NFAM1Q8NET5 270 aaPredicted RBP12.01□□□□□ -0.49
SPG7-209ENST00000564047 OR52R1Q8NGF1 315 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 OR1N1Q8NGS0 311 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 PNPT1Q8TCS8 783 aaKnown RBP12.01□□□□□ -0.49
SPG7-209ENST00000564047 SLC2A12Q8TD20 617 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 ZNF721Q8TF20 911 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 NAF1Q96HR8 494 aaKnown RBP12.01□□□□□ -0.49
SPG7-209ENST00000564047 VPS50Q96JG6 964 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 CLPTM1LQ96KA5 538 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 ZNF570Q96NI8 536 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 ECSITQ9BQ95 431 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 EFHD1Q9BUP0 239 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 SPATA9Q9BWV2 254 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 ZNF700Q9H0M5 742 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 OR10A5Q9H207 317 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 ANKRA2Q9H9E1 313 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 GPN2Q9H9Y4 310 aaPredicted RBP12.01□□□□□ -0.49
SPG7-209ENST00000564047 PRODH2Q9UF12 536 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 CD300AQ9UGN4 299 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 FAF1Q9UNN5 650 aaPredicted RBP12.01□□□□□ -0.49
SPG7-209ENST00000564047 CFL2Q9Y281 166 aa12.01□□□□□ -0.49
SPG7-209ENST00000564047 IGHV1-45A0A0A0MS14 117 aa12□□□□□ -0.49
SPG7-209ENST00000564047 PRORSD1PA6NEY8 169 aa12□□□□□ -0.49
SPG7-209ENST00000564047 SOCS6O14544 535 aa12□□□□□ -0.49
SPG7-209ENST00000564047 ASNA1O43681 348 aa12□□□□□ -0.49
SPG7-209ENST00000564047 SOX30O94993 753 aa12□□□□□ -0.49
SPG7-209ENST00000564047 CLPSP04118 112 aa12□□□□□ -0.49
SPG7-209ENST00000564047 BMP2P12643 396 aa12□□□□□ -0.49
SPG7-209ENST00000564047 HSD17B1P14061 328 aa12□□□□□ -0.49
SPG7-209ENST00000564047 ANPEPP15144 967 aa12□□□□□ -0.49
SPG7-209ENST00000564047 MATN1P21941 496 aa12□□□□□ -0.49
SPG7-209ENST00000564047 ITPKBP27987 946 aa12□□□□□ -0.49
SPG7-209ENST00000564047 SSTR4P31391 388 aa12□□□□□ -0.49
SPG7-209ENST00000564047 CRATP43155 626 aa12□□□□□ -0.49
SPG7-209ENST00000564047 KHKP50053 298 aa12□□□□□ -0.49
SPG7-209ENST00000564047 EMDP50402 254 aa12□□□□□ -0.49
SPG7-209ENST00000564047 GZMMP51124 257 aa12□□□□□ -0.49
SPG7-209ENST00000564047 GPR143P51810 404 aa12□□□□□ -0.49
SPG7-209ENST00000564047 DUSP8Q13202 625 aa12□□□□□ -0.49
SPG7-209ENST00000564047 CEACAM7Q14002 265 aa12□□□□□ -0.49
SPG7-209ENST00000564047 LASP1Q14847 261 aaKnown RBP12□□□□□ -0.49
SPG7-209ENST00000564047 PCOLCEQ15113 449 aa12□□□□□ -0.49
SPG7-209ENST00000564047 TGIF1Q15583 401 aa12□□□□□ -0.49
SPG7-209ENST00000564047 COX20Q5RI15 118 aa12□□□□□ -0.49
SPG7-209ENST00000564047 EXOSC6Q5RKV6 272 aaKnown RBP12□□□□□ -0.49
SPG7-209ENST00000564047 DDX59Q5T1V6 619 aaKnown RBP eCLIP12□□□□□ -0.49
SPG7-209ENST00000564047 CDC73Q6P1J9 531 aa12□□□□□ -0.49
SPG7-209ENST00000564047 KIRREL2Q6UWL6 708 aa12□□□□□ -0.49
SPG7-209ENST00000564047 RNF111Q6ZNA4 994 aa12□□□□□ -0.49
SPG7-209ENST00000564047 PPP1R32Q7Z5V6 425 aa12□□□□□ -0.49
SPG7-209ENST00000564047 CALHM3Q86XJ0 350 aa12□□□□□ -0.49
SPG7-209ENST00000564047 RAB43Q86YS6 212 aa12□□□□□ -0.49
SPG7-209ENST00000564047 CDRT4Q8N9R6 151 aa12□□□□□ -0.49
SPG7-209ENST00000564047 SIMC1Q8NDZ2 872 aa12□□□□□ -0.49
SPG7-209ENST00000564047 B3GNT7Q8NFL0 401 aa12□□□□□ -0.49
SPG7-209ENST00000564047 OR10A6Q8NH74 314 aa12□□□□□ -0.49
SPG7-209ENST00000564047 DNAJC9Q8WXX5 260 aa12□□□□□ -0.49
SPG7-209ENST00000564047 HOXB13Q92826 284 aaPredicted RBP12□□□□□ -0.49
SPG7-209ENST00000564047 C8orf44Q96CB5 159 aa12□□□□□ -0.49
SPG7-209ENST00000564047 C16orf58Q96GQ5 468 aa12□□□□□ -0.49
SPG7-209ENST00000564047 ZNF583Q96ND8 569 aa12□□□□□ -0.49
SPG7-209ENST00000564047 MESP1Q9BRJ9 268 aa12□□□□□ -0.49
SPG7-209ENST00000564047 ACTRT3Q9BYD9 372 aa12□□□□□ -0.49
SPG7-209ENST00000564047 OR8D2Q9GZM6 311 aa12□□□□□ -0.49
SPG7-209ENST00000564047 SERHL2Q9H4I8 314 aa12□□□□□ -0.49
SPG7-209ENST00000564047 ALG2Q9H553 416 aa12□□□□□ -0.49
SPG7-209ENST00000564047 S100A14Q9HCY8 104 aa12□□□□□ -0.49
SPG7-209ENST00000564047 THUMPD1Q9NXG2 353 aaKnown RBP12□□□□□ -0.49
SPG7-209ENST00000564047 GIN1Q9NXP7 522 aa12□□□□□ -0.49
SPG7-209ENST00000564047 COPS7AQ9UBW8 275 aa12□□□□□ -0.49
SPG7-209ENST00000564047 HEMK1Q9Y5R4 338 aaPredicted RBP12□□□□□ -0.49
SPG7-209ENST00000564047 SDK2Q58EX2 2172 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms