RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SH3PXD2BA1X283 911 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 SLC9B1P1A6NJY1 282 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 ZAR1LA6NP61 321 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 RDH16O75452 317 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 UBXN7O94888 489 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 SOX14O95416 240 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 ADAP00813 363 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 ALPPP05187 535 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 POU1F1P28069 291 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 CRISP1P54107 249 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 DUSP5Q16690 384 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 FAM214AQ32MH5 1076 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 FHL5Q5TD97 284 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 HEPHL1Q6MZM0 1159 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 PODNL1Q6PEZ8 512 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 SLC16A12Q6ZSM3 486 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 SAMD14Q8IZD0 417 aaPredicted RBP17.89■□□□□ 0.45
SMPD3-203ENST00000563226 ARHGEF39Q8N4T4 335 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 SELENONQ9NZV5 590 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 LIPT1Q9Y234 373 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 CASC3O15234 703 aaKnown RBP17.89■□□□□ 0.45
SMPD3-203ENST00000563226 MED26O95402 600 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 ACP2P11117 423 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 MVKQ03426 396 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 DYNC1I2Q13409 638 aaKnown RBP17.89■□□□□ 0.45
SMPD3-203ENST00000563226 MANEAQ5SRI9 462 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 ATAD3BQ5T9A4 648 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 MLIPQ5VWP3 458 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 DNAJC22Q8N4W6 341 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 OR9A4Q8NGU2 314 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 FAM174AQ8TBP5 190 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 UCK2Q9BZX2 261 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 MKLN1Q9UL63 735 aa17.89■□□□□ 0.45
SMPD3-203ENST00000563226 PCDH15Q96QU1 1955 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 TLR4O00206 839 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 NOL3O60936 208 aaKnown RBP17.88■□□□□ 0.45
SMPD3-203ENST00000563226 OXSR1O95747 527 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-203ENST00000563226 ACVR2AP27037 513 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 CNR2P34972 360 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 CTSKP43235 329 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 SRSF5Q13243 272 aaKnown RBP17.88■□□□□ 0.45
SMPD3-203ENST00000563226 ELOCQ15369 112 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 FRRS1Q6ZNA5 592 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 PRSS48Q7RTY5 328 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 LSRQ86X29 649 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-203ENST00000563226 IPCEF1Q8WWN9 437 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-203ENST00000563226 PRRC1Q96M27 445 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 FNDC11Q9BVV2 318 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 CCNB1IP1Q9NPC3 277 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 ACOT13Q9NPJ3 140 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 C11orf16Q9NQ32 467 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 PRDM9Q9NQV7 894 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 PTGFRNQ9P2B2 879 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 PSORS1C1Q9UIG5 152 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 MGAT4BQ9UQ53 548 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 MRPS17Q9Y2R5 130 aaKnown RBP17.88■□□□□ 0.45
SMPD3-203ENST00000563226 TP53BP1Q12888 1972 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-203ENST00000563226 SPAG17Q6Q759 2223 aa17.88■□□□□ 0.45
SMPD3-203ENST00000563226 A0A1W2PRQ8 180 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 CT62P0C5K7 136 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 CDK4P11802 303 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 RPL6Q02878 288 aaKnown RBP17.87■□□□□ 0.45
SMPD3-203ENST00000563226 NFATC3Q12968 1075 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 AQP6Q13520 282 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 DGCR6Q14129 220 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 CCNJQ5T5M9 372 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 FAM92BQ6ZTR7 304 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 SIX5Q8N196 739 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 DEPDC4Q8N2C3 294 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 RAB2BQ8WUD1 216 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 RORBQ92753 470 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 GGHQ92820 318 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 MAP3K3Q99759 626 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 ARHGDIGQ99819 225 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 RBCK1Q9BYM8 510 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 CHRDQ9H2X0 955 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 ADAP2Q9NPF8 381 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 IMPAD1Q9NX62 359 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 FBXL21Q9UKT6 434 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 EML5Q05BV3 1969 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 MYO15AQ9UKN7 3530 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 CENPVL1A0A0U1RR11 272 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 FOXD2O60548 495 aaPredicted RBP17.87■□□□□ 0.45
SMPD3-203ENST00000563226 NTN1O95631 604 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 GPR75O95800 540 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 OSMP13725 252 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 CCNA2P20248 432 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 NT5EP21589 574 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 C21orf33P30042 268 aaPredicted RBP17.87■□□□□ 0.45
SMPD3-203ENST00000563226 FASLGP48023 281 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 UGT2B15P54855 530 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 STARD6P59095 220 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 MCATQ8IVS2 390 aaKnown RBP17.87■□□□□ 0.45
SMPD3-203ENST00000563226 CLIP4Q8N3C7 705 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 HSPA12BQ96MM6 686 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 COPS4Q9BT78 406 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 PLCXD1Q9NUJ7 323 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 CALML5Q9NZT1 146 aa17.87■□□□□ 0.45
SMPD3-203ENST00000563226 C19orf53Q9UNZ5 99 aaPredicted RBP17.87■□□□□ 0.45
SMPD3-203ENST00000563226 DOLKQ9UPQ8 538 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms