RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 SIMC1Q8NDZ2 872 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 OR4F6Q8NGB9 312 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 SLC44A1Q8WWI5 657 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 SELENOMQ8WWX9 145 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 TMBIM1Q969X1 311 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 ISL2Q96A47 359 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 DTNBP1Q96EV8 351 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 C18orf12Q96KH6 178 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 SFXN2Q96NB2 322 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 ZFP3Q96NJ6 502 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 SMR3AQ99954 134 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 NTMT1Q9BV86 223 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 OR2B2Q9GZK3 357 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 FARSBQ9NSD9 589 aaKnown RBP11.81□□□□□ -0.52
SF3B3-202ENST00000562722 NMRK1Q9NWW6 199 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 XPR1Q9UBH6 696 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 DKKL1Q9UK85 242 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 EXO1Q9UQ84 846 aaKnown RBP11.81□□□□□ -0.52
SF3B3-202ENST00000562722 KIAA1549Q9HCM3 1950 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 STX16-NPEPL1H3BU86 382 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 STX16O14662 325 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 RCBTB2O95199 551 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 CBX7O95931 251 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 OTCP00480 354 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 PDYNP01213 254 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 INHBAP08476 426 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 KRT20P35900 424 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 PTGDSP41222 190 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 STARP49675 285 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 MRPS35P82673 323 aaKnown RBP11.8□□□□□ -0.52
SF3B3-202ENST00000562722 SLC7A5Q01650 507 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 GUCY2DQ02846 1103 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 LTBQ06643 244 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 MGAT2Q10469 447 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 GAB1Q13480 694 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 TRMT12Q53H54 448 aaKnown RBP11.8□□□□□ -0.52
SF3B3-202ENST00000562722 TMEM81Q6P7N7 255 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 TAOK1Q7L7X3 1001 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 CHMP1BQ7LBR1 199 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 PLCZ1Q86YW0 608 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 WDSUB1Q8N9V3 476 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 TRPC4APQ8TEL6 797 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 WNT2BQ93097 391 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 COL21A1Q96P44 957 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 PIGMQ9H3S5 423 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 ZNF395Q9H8N7 513 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-202ENST00000562722 ZBTB26Q9HCK0 441 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 BEX4Q9NWD9 120 aaPredicted RBP11.8□□□□□ -0.52
SF3B3-202ENST00000562722 NDRG3Q9UGV2 375 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 UTS2RQ9UKP6 389 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 PACSIN3Q9UKS6 424 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 CES1P1Q9UKY3 287 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 SNX6Q9UNH7 406 aa11.8□□□□□ -0.52
SF3B3-202ENST00000562722 FRG2CA6NGY1 282 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 SMNDC1O75940 238 aaKnown RBP eCLIP11.79□□□□□ -0.52
SF3B3-202ENST00000562722 INHBBP09529 407 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 FREM3P0C091 2139 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 TSPAN8P19075 237 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 DRD5P21918 477 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 IL12BP29460 328 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 SRD5A2P31213 254 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 PPICP45877 212 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 CDH13P55290 713 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 NKX6-1P78426 367 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-202ENST00000562722 HMGCS1Q01581 520 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 DUSP2Q05923 314 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 GALNT1Q10472 559 aaPredicted RBP11.79□□□□□ -0.52
SF3B3-202ENST00000562722 ERCC6LQ2NKX8 1250 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 TSNAXIP1Q2TAA8 658 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 GGTA1PQ4G0N0 100 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 OR5M10Q6IEU7 315 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 CLEC9AQ6UXN8 241 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 RPS27LQ71UM5 84 aaKnown RBP11.79□□□□□ -0.52
SF3B3-202ENST00000562722 P3H2Q8IVL5 708 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 C1orf52Q8N6N3 182 aaKnown RBP11.79□□□□□ -0.52
SF3B3-202ENST00000562722 TM4SF18Q96CE8 201 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 ADOQ96SZ5 270 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 HBEGFQ99075 208 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 ACSS3Q9H6R3 686 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 NINJ2Q9NZG7 142 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 SENP1Q9P0U3 644 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 ZNF639Q9UID6 485 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 FBXL2Q9UKC9 423 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 WIF1Q9Y5W5 379 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 ACANP16112 2415 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 VPS13CQ709C8 3753 aa11.79□□□□□ -0.52
SF3B3-202ENST00000562722 OR6C70A6NIJ9 312 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 PLOD2O00469 737 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 ARHGEF9O43307 516 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 ABCB7O75027 752 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 BCAS2O75934 225 aaPredicted RBP11.78□□□□□ -0.52
SF3B3-202ENST00000562722 CD53P19397 219 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 CHMP24386 653 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 HOXC12P31275 282 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 EMDP50402 254 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 GFRA1P56159 465 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 EEF1A1P68104 462 aaKnown RBP11.78□□□□□ -0.52
SF3B3-202ENST00000562722 EFR3AQ14156 821 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 TEX35Q5T0J7 233 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 EEF1A1P5Q5VTE0 462 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms