RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 ZSCAN30Q86W11 494 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 WDR49Q8IV35 697 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 SLC22A18ASQ8N1D0 253 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 FIBINQ8TAL6 211 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 FBXO25Q8TCJ0 367 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 TBCKQ8TEA7 893 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 HAS2Q92819 552 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 ATP6V1E2Q96A05 226 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 CFAP36Q96G28 342 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 JAKMIP1Q96N16 626 aaKnown RBP2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 MCCC1Q96RQ3 725 aaPredicted RBP2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 SLITRK2Q9H156 845 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 GDF3Q9NR23 364 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 FAM212BQ9NTI7 297 aaPredicted RBP2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 SEC14L4Q9UDX3 406 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 RSPH14Q9UHP6 348 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 RNF24Q9Y225 148 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 POLR3AO14802 1390 aaPredicted RBP2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 PARD3Q8TEW0 1356 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 CRB1P82279 1406 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 NFAT5O94916 1531 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 USP54Q70EL1 1684 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 FAM208AQ9UK61 1670 aaKnown RBP2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 MAP2P11137 1827 aaKnown RBP2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 FER1L5A0AVI2 2057 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 CACNA1SQ13698 1873 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 KIF13BQ9NQT8 1826 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 C5P01031 1676 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 TRPM1Q7Z4N2 1603 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 OVOS2A0A0G2JMS6 1433 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 OVOS2A0A0J9YW53 1432 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 OVOS2Q6IE36 1432 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 PPIP5K1Q6PFW1 1433 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 CPDO75976 1380 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 RAB3GAP2Q9H2M9 1393 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 FAM168BA1KXE4 195 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 ZSCAN5CA6NGD5 496 aaPredicted RBP2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 SLC15A5A6NIM6 579 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 MEI4A8MW99 385 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 HAT1O14929 419 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 SLC7A4O43246 635 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 CPNE6O95741 557 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 SNRPCP09234 159 aaKnown RBP2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 SBK2P0C263 348 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 TPBGLP0DKB5 382 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 MBL2P11226 248 aaPredicted RBP2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 MTIF2P46199 727 aaKnown RBP2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 IST1P53990 364 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 SLC12A3P55017 1021 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 GIT2Q14161 759 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 CDC37Q16543 378 aaPredicted RBP2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 STX1AQ16623 288 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 C14orf28Q4W4Y0 310 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 UNC50Q53HI1 259 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 KHDRBS2Q5VWX1 349 aaKnown RBP2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 WDR25Q64LD2 544 aaPredicted RBP2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 TOM1L2Q6ZVM7 507 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 ITIH5Q86UX2 942 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 PARP8Q8N3A8 854 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 CHCHD4Q8N4Q1 142 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 ZNF491Q8N8L2 437 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 CHDHQ8NE62 594 aaPredicted RBP2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 OR6M1Q8NGM8 313 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 OR4F5Q8NH21 305 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 PNPLA2Q96AD5 504 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 NTNG2Q96CW9 530 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 PPP1R16AQ96I34 528 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 ANP32EQ9BTT0 268 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 CACNG6Q9BXT2 260 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 CXXC4Q9H2H0 198 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 MAGEF1Q9HAY2 307 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 TECRQ9NZ01 308 aaKnown RBP2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 SPG21Q9NZD8 308 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 CNIH4Q9P003 139 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 NYAP2Q9P242 653 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 MRTO4Q9UKD2 239 aaKnown RBP2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 ZFP37Q9Y6Q3 630 aaPredicted RBP2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 KIF25-AS1Q9Y6Z4 181 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
HDGFL3-202ENST00000562702 WDR90Q96KV7 1748 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 USP6P35125 1406 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 NSD2O96028 1365 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 CACNB4O00305 520 aaPredicted RBP2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 TSPAN2O60636 221 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 STBD1O95210 358 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 LY6G6DO95868 133 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 CHRNGP07510 517 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 NUDT17P0C025 328 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 UROSP10746 265 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 VCLP18206 1134 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 CYP3A5P20815 502 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 TNNT3P45378 269 aaPredicted RBP2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 FNTAP49354 379 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 SERPINH1P50454 418 aaKnown RBP2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 GEMP55040 296 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 LYZP61626 148 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 KRT83P78385 493 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 RCN2Q14257 317 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 TRADDQ15628 312 aa2.28□□□□□ -2.04
HDGFL3-202ENST00000562702 LTB4RQ15722 352 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms