RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 EMC3Q9P0I2 261 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 ZNF624Q9P2J8 865 aaPredicted RBP13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 ERVK-19Q9WJR5 959 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 PRSS21Q9Y6M0 314 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 G3V3Q6 166 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 FPGTO14772 594 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 GUCA1CO95843 209 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 CPEP16870 476 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 GPX2P18283 190 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 GDF5P43026 501 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 CRISP1P54107 249 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 NTHL1P78549 312 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 PCBP2Q15366 365 aaKnown RBP eCLIP13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 ALKAL2Q6UX46 152 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 WASH2PQ6VEQ5 465 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 SERPINA9Q86WD7 417 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 LKAAEAR1Q8TD35 194 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 THAP7Q9BT49 309 aaPredicted RBP13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 SARGQ9BW04 601 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 BCL2L14Q9BZR8 327 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 LINC00597Q9H2U6 94 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 C11orf49Q9H6J7 331 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 METTL17Q9H7H0 456 aaPredicted RBP13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 EXTL2Q9UBQ6 330 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 CTSFQ9UBX1 484 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 FTSJ1Q9UET6 329 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 GSTK1Q9Y2Q3 226 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 GBF1Q92538 1859 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 SPTBN5Q9NRC6 3674 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 TMEM229AB2RXF0 380 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 AIPO00170 330 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 LINC00271P0C7V0 271 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 SULT1A3P0DMM9 295 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 SULT1A4P0DMN0 295 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 RIPPLY1Q0D2K3 151 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 ST3GAL2Q16842 350 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 RAET1GQ6H3X3 334 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 ASTLQ6HA08 431 aaPredicted RBP13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 HTR3DQ70Z44 454 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 FAM126AQ9BYI3 521 aaPredicted RBP13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 TINAGL1Q9GZM7 467 aaPredicted RBP13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 IL26Q9NPH9 171 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 NUDT4Q9NZJ9 180 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 GPR160Q9UJ42 338 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 GABRR3A8MPY1 467 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 NEDD8-MDP1E9PL57 170 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 J3KTA2 159 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 TLR4O00206 839 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 GAPDHSO14556 408 aaPredicted RBP13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 CPSF4O95639 269 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 S100A6P06703 90 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 FABP1P07148 127 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 ADRB1P08588 477 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 TFPIP10646 304 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 SRP9P49458 86 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 ARHGDIBP52566 201 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 PLK5Q496M5 336 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 SPIN4Q56A73 249 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 C1orf53Q5VUE5 145 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 FAM198BQ6UWH4 519 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 USP45Q70EL2 814 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 AQP11Q8NBQ7 271 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 UXS1Q8NBZ7 420 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 PLA2G15Q8NCC3 412 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 NELL1Q92832 810 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 RFT1Q96AA3 541 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 LRRC46Q96FV0 321 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 DDOQ99489 341 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 PIP5K1AQ99755 562 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 DPAGT1Q9H3H5 408 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 NSUN3Q9H649 340 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 BEX1Q9HBH7 125 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 FZD3Q9NPG1 666 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 PTPRSQ13332 1948 aa13.25□□□□□ -0.29
GTF3C1-203ENST00000562609 KIAA1671Q9BY89 1806 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 NPIPB15A6NHN6 443 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 CASC3O15234 703 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 TRBC1P01850 177 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 TCRBP04435 133 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 ELK1P19419 428 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 PPM1AP35813 382 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 SELENOPP49908 381 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 MAZP56270 477 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 FABP5Q01469 135 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 FGL1Q08830 312 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 GRIN2CQ14957 1233 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 PTRHD1Q6GMV3 140 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 LILRA6Q6PI73 481 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 ZNF783Q6ZMS7 281 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 WDR53Q7Z5U6 358 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 HSD17B8Q92506 261 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 SLC6A18Q96N87 628 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 TSSK6Q9BXA6 273 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 SAP130Q9H0E3 1048 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 ASIC5Q9NY37 505 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 PURGQ9UJV8 347 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 MAGEB17A8MXT2 336 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 GLUD1P00367 558 aa13.24□□□□□ -0.29
GTF3C1-203ENST00000562609 RAB8AP61006 207 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms