RNA–Protein interactions for RNA: ENST00000562589.5

E4F1-202, Transcript of E4F transcription factor 1, humanhuman

TSL 5

Gene E4F1, Length 817 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-202ENST00000562589 FOLH1BQ9HBA9 442 aa23.08■■□□□ 1.29
E4F1-202ENST00000562589 NKIRAS1Q9NYS0 192 aa23.08■■□□□ 1.29
E4F1-202ENST00000562589 SPTBN1Q01082 2364 aaKnown RBP23.08■■□□□ 1.29
E4F1-202ENST00000562589 GTF3C1Q12789 2109 aa23.08■■□□□ 1.28
E4F1-202ENST00000562589 FAM166BA8MTA8 275 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 COQ9O75208 318 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 FRKP42685 505 aaPredicted RBP23.07■■□□□ 1.28
E4F1-202ENST00000562589 PER3P56645 1201 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 KCNJ2P63252 427 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 RPP38P78345 283 aaKnown RBP23.07■■□□□ 1.28
E4F1-202ENST00000562589 HSF1Q00613 529 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 PDCD2Q16342 344 aaPredicted RBP23.07■■□□□ 1.28
E4F1-202ENST00000562589 SMU1Q2TAY7 513 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 IL23RQ5VWK5 629 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 SLC34A3Q8N130 599 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 MGARPQ8TDB4 240 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 DIO2Q92813 273 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 CIDECQ96AQ7 238 aaPredicted RBP23.07■■□□□ 1.28
E4F1-202ENST00000562589 OMA1Q96E52 524 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 C1orf50Q9BV19 199 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 SH3BP4Q9P0V3 963 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 ATP6V1HQ9UI12 483 aa23.07■■□□□ 1.28
E4F1-202ENST00000562589 NINQ8N4C6 2090 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 TRGV8A0A0C4DH27 118 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 UPK1AO00322 258 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 ERN1O75460 977 aaKnown RBP23.06■■□□□ 1.28
E4F1-202ENST00000562589 PSMG1O95456 288 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 DDX5P17844 614 aaKnown RBP23.06■■□□□ 1.28
E4F1-202ENST00000562589 HPCAL1P37235 193 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 RPL3P39023 403 aaKnown RBP23.06■■□□□ 1.28
E4F1-202ENST00000562589 CASP6P55212 293 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 EMX2Q04743 252 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 PLCXD2Q0VAA5 305 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 MAD2L1Q13257 205 aaPredicted RBP23.06■■□□□ 1.28
E4F1-202ENST00000562589 ZNF551Q7Z340 670 aaPredicted RBP23.06■■□□□ 1.28
E4F1-202ENST00000562589 NUP54Q7Z3B4 507 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 FGD2Q7Z6J4 655 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 FJX1Q86VR8 437 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 FAM109AQ8N4B1 249 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 TMEM251Q8N6I4 163 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 ARL8AQ96BM9 186 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 ZBED6CLQ96FA7 236 aaPredicted RBP23.06■■□□□ 1.28
E4F1-202ENST00000562589 ANGPTL4Q9BY76 406 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 DEFB127Q9H1M4 99 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 ZFP64Q9NPA5 681 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 ACSS1Q9NUB1 689 aaPredicted RBP23.06■■□□□ 1.28
E4F1-202ENST00000562589 ASIC5Q9NY37 505 aa23.06■■□□□ 1.28
E4F1-202ENST00000562589 BOKQ9UMX3 212 aaPredicted RBP23.06■■□□□ 1.28
E4F1-202ENST00000562589 EIF3LQ9Y262 564 aaKnown RBP23.06■■□□□ 1.28
E4F1-202ENST00000562589 SETXQ7Z333 2677 aaKnown RBP23.06■■□□□ 1.28
E4F1-202ENST00000562589 MYO7BQ6PIF6 2116 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 SCAMP2O15127 329 aaKnown RBP23.05■■□□□ 1.28
E4F1-202ENST00000562589 TRIM3O75382 744 aaPredicted RBP23.05■■□□□ 1.28
E4F1-202ENST00000562589 NME6O75414 186 aaPredicted RBP23.05■■□□□ 1.28
E4F1-202ENST00000562589 CORO7P57737 925 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 PTGR1Q14914 329 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 C3AR1Q16581 482 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 TMEM81Q6P7N7 255 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 PAOXQ6QHF9 649 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 NPSR1Q6W5P4 371 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 ZFP28Q8NHY6 868 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 RAB3IL1Q8TBN0 382 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 HGDQ93099 445 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 NTNG2Q96CW9 530 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 DOHHQ9BU89 302 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 DDX18Q9NVP1 670 aaKnown RBP23.05■■□□□ 1.28
E4F1-202ENST00000562589 THAP1Q9NVV9 213 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 ARGLU1Q9NWB6 273 aaPredicted RBP23.05■■□□□ 1.28
E4F1-202ENST00000562589 ICE1Q9Y2F5 2266 aa23.05■■□□□ 1.28
E4F1-202ENST00000562589 ZNF407Q9C0G0 2248 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 A0A1B0GTH9 108 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 LRRC3CA6NJW4 275 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 CDC40O60508 579 aaKnown RBP eCLIP23.04■■□□□ 1.28
E4F1-202ENST00000562589 SNNO75324 88 aaPredicted RBP23.04■■□□□ 1.28
E4F1-202ENST00000562589 SNX4O95219 450 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 H2AFXP16104 143 aaPredicted RBP23.04■■□□□ 1.28
E4F1-202ENST00000562589 ABOP16442 354 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 CASP3P42574 277 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 MAGEA5P43359 124 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 HSPB3Q12988 150 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 BICRALQ6AI39 1079 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 ARHGAP11AQ6P4F7 1023 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 TMBIM1Q969X1 311 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 AKTIPQ9H8T0 292 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 PNPOQ9NVS9 261 aa23.04■■□□□ 1.28
E4F1-202ENST00000562589 NOP53Q9NZM5 478 aaKnown RBP23.04■■□□□ 1.28
E4F1-202ENST00000562589 OR6C70A6NIJ9 312 aa23.03■■□□□ 1.28
E4F1-202ENST00000562589 PDE9AO76083 593 aa23.03■■□□□ 1.28
E4F1-202ENST00000562589 IGHG3P01860 377 aa23.03■■□□□ 1.28
E4F1-202ENST00000562589 PRPS1L1P21108 318 aa23.03■■□□□ 1.28
E4F1-202ENST00000562589 PTGS2P35354 604 aa23.03■■□□□ 1.28
E4F1-202ENST00000562589 MANFP55145 182 aaKnown RBP23.03■■□□□ 1.28
E4F1-202ENST00000562589 ZNF155Q12901 538 aaPredicted RBP23.03■■□□□ 1.28
E4F1-202ENST00000562589 HDXQ7Z353 690 aa23.03■■□□□ 1.28
E4F1-202ENST00000562589 TRIM42Q8IWZ5 723 aa23.03■■□□□ 1.28
E4F1-202ENST00000562589 LRRC34Q8IZ02 419 aa23.03■■□□□ 1.28
E4F1-202ENST00000562589 OR7A2PQ8NGA2 310 aa23.03■■□□□ 1.28
E4F1-202ENST00000562589 SLC35A4Q96G79 324 aa23.03■■□□□ 1.28
E4F1-202ENST00000562589 PPP1R36Q96LQ0 422 aa23.03■■□□□ 1.28
E4F1-202ENST00000562589 RILPQ96NA2 401 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms