RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 PSD2Q9BQI7 771 aa8.89□□□□□ -0.99
CDH13-205ENST00000562307 LMF2Q9BU23 707 aaKnown RBP8.89□□□□□ -0.99
CDH13-205ENST00000562307 PINK1Q9BXM7 581 aa8.89□□□□□ -0.99
CDH13-205ENST00000562307 MTHFD2LQ9H903 347 aaPredicted RBP8.89□□□□□ -0.99
CDH13-205ENST00000562307 FANCEQ9HB96 536 aa8.89□□□□□ -0.99
CDH13-205ENST00000562307 EQTNQ9NQ60 294 aa8.89□□□□□ -0.99
CDH13-205ENST00000562307 SIDT1Q9NXL6 827 aaKnown RBP8.89□□□□□ -0.99
CDH13-205ENST00000562307 SEC14L3Q9UDX4 400 aa8.89□□□□□ -0.99
CDH13-205ENST00000562307 GMEB2Q9UKD1 530 aa8.89□□□□□ -0.99
CDH13-205ENST00000562307 ACAD8Q9UKU7 415 aa8.89□□□□□ -0.99
CDH13-205ENST00000562307 SRPK3Q9UPE1 567 aa8.89□□□□□ -0.99
CDH13-205ENST00000562307 SH3GLB1Q9Y371 365 aa8.89□□□□□ -0.99
CDH13-205ENST00000562307 SAMHD1Q9Y3Z3 626 aaKnown RBP8.89□□□□□ -0.99
CDH13-205ENST00000562307 LYVE1Q9Y5Y7 322 aa8.89□□□□□ -0.99
CDH13-205ENST00000562307 GOLGA4Q13439 2230 aaKnown RBP8.88□□□□□ -0.99
CDH13-205ENST00000562307 IGKV3D-11A0A0A0MRZ8 115 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 A0A1B0GX78 115 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 TTC36A6NLP5 189 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 E9PQ18 207 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 TNFRSF11BO00300 401 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 KHNYNO15037 678 aaKnown RBP8.88□□□□□ -0.99
CDH13-205ENST00000562307 SLC16A6O15403 523 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 ZIC2O95409 532 aaPredicted RBP8.88□□□□□ -0.99
CDH13-205ENST00000562307 EPPINO95925 133 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 PABPC4LP0CB38 370 aaKnown RBP8.88□□□□□ -0.99
CDH13-205ENST00000562307 ALAS2P22557 587 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 RRM2P31350 389 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 RORAP35398 523 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 OR1D4P47884 311 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 EMDP50402 254 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 DAPP51397 102 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 NUBP1P53384 320 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 CHRNEQ04844 493 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 PPP1R8Q12972 351 aaKnown RBP8.88□□□□□ -0.99
CDH13-205ENST00000562307 DUSP8Q13202 625 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 TRA2AQ13595 282 aaKnown RBP eCLIP8.88□□□□□ -0.99
CDH13-205ENST00000562307 COL9A2Q14055 689 aaPredicted RBP8.88□□□□□ -0.99
CDH13-205ENST00000562307 ERV3-1Q14264 604 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 EXOSC7Q15024 291 aaKnown RBP8.88□□□□□ -0.99
CDH13-205ENST00000562307 TTC23Q5W5X9 447 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 TCTN3Q6NUS6 607 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 FRRS1Q6ZNA5 592 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 QSOX2Q6ZRP7 698 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 C16orf62Q7Z3J2 963 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 CYP4Z1Q86W10 505 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 BPHLQ86WA6 291 aaPredicted RBP8.88□□□□□ -0.99
CDH13-205ENST00000562307 SLITRK4Q8IW52 837 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 OR52R1Q8NGF1 315 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 SLC9A6Q92581 669 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 CDS1Q92903 461 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 FKBP10Q96AY3 582 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 DHRS1Q96LJ7 313 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 CNBD2Q96M20 576 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 DGAT2Q96PD7 388 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 MBOAT4Q96T53 435 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 SDF2Q99470 211 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 ARHGDIGQ99819 225 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 GTPBP2Q9BX10 602 aaKnown RBP8.88□□□□□ -0.99
CDH13-205ENST00000562307 RBCK1Q9BYM8 510 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 TGIF2Q9GZN2 237 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 ZNF350Q9GZX5 532 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 ARRDC1-AS1Q9H2J1 176 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 TOR3AQ9H497 397 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 ZNF696Q9H7X3 374 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 ZNF304Q9HCX3 659 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 ADAP2Q9NPF8 381 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 NECTIN3Q9NQS3 549 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 POLE3Q9NRF9 147 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 ACER3Q9NUN7 267 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 FAM118AQ9NWS6 357 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 DHCR7Q9UBM7 475 aaKnown RBP8.88□□□□□ -0.99
CDH13-205ENST00000562307 C3orf18Q9UK00 162 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 IFT52Q9Y366 437 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 FAM32AQ9Y421 112 aaKnown RBP8.88□□□□□ -0.99
CDH13-205ENST00000562307 PCDHGB5Q9Y5G0 923 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 MAU2Q9Y6X3 613 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 U3KQV3 271 aa8.88□□□□□ -0.99
CDH13-205ENST00000562307 IGLV3-12A0A075B6K2 115 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 SYNDIG1LA6NDD5 238 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 ARRDC5A6NEK1 342 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 FFAR1O14842 300 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 GALR2O43603 387 aaPredicted RBP8.87□□□□□ -0.99
CDH13-205ENST00000562307 HS6ST1O60243 411 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 FCMRO60667 390 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 SEMA7AO75326 666 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 NME6O75414 186 aaPredicted RBP8.87□□□□□ -0.99
CDH13-205ENST00000562307 JRKO75564 520 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 ALBP02768 609 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 ALPPP05187 535 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 GP1BAP07359 652 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 THBS1P07996 1170 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 UBTFL6P0CB48 400 aaPredicted RBP8.87□□□□□ -0.99
CDH13-205ENST00000562307 ITGAMP11215 1152 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 MAOAP21397 527 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 FBLP22087 321 aaKnown RBP8.87□□□□□ -0.99
CDH13-205ENST00000562307 RPS4Y1P22090 263 aaKnown RBP8.87□□□□□ -0.99
CDH13-205ENST00000562307 ACP1P24666 158 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 PRKAR1BP31321 381 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 GRK6P43250 576 aa8.87□□□□□ -0.99
CDH13-205ENST00000562307 PDX1P52945 283 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms