RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 PHF21AQ96BD5 680 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 SENP5Q96HI0 755 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 ZCCHC3Q9NUD5 404 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 CNIH4Q9P003 139 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 TAC3Q9UHF0 121 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 FEZF1A0PJY2 475 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 TEX28O15482 410 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 FAM157BP0CG42 384 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 TYRP14679 529 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 PTGER1P34995 402 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 BSGP35613 385 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 ADAM15Q13444 863 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 ZNF791Q3KP31 576 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 KIAA1161Q6NSJ0 714 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 CD200R1LQ6Q8B3 271 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 C17orf64Q86WR6 236 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 CCDC28AQ8IWP9 274 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 HCAR2Q8TDS4 363 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 UCN3Q969E3 161 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 PRRC1Q96M27 445 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 ZNF558Q96NG5 402 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 ZNF717Q9BY31 904 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 ZCCHC2Q9C0B9 1178 aaKnown RBP13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 TEX10Q9NXF1 929 aaPredicted RBP13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 PLXNA2O75051 1894 aa13.16□□□□□ -0.3
VPS9D1-202ENST00000561976 SHISA3A0PJX4 238 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 FAM170BA6NMN3 283 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 K7ESM1 405 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 RFXAPO00287 272 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 POP7O75817 140 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 UBXN7O94888 489 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 SERPIND1P05546 499 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 IFNA8P32881 189 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 MMP12P39900 470 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 TAS2R41P59536 307 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 LRRC32Q14392 662 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 TMEM215Q68D42 235 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 RAET1GQ6H3X3 334 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 LAMTOR1Q6IAA8 161 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 B3GLCTQ6Y288 498 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 ASB18Q6ZVZ8 466 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 FAM129CQ86XR2 697 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 OR8H1Q8NGG4 311 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 OR8D4Q8NGM9 314 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 NRTNQ99748 197 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 SPATA5L1Q9BVQ7 753 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 EXTL2Q9UBQ6 330 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 A0A087WUU8 490 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 KPNA3O00505 521 aaPredicted RBP13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 AKAP8O43823 692 aaKnown RBP13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 TBX6O95947 436 aaPredicted RBP13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 RB1P06400 928 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 UQCRC1P31930 480 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 IDNKQ5T6J7 187 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 SIX5Q8N196 739 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 KLHL36Q8N4N3 616 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 DTX3Q8N9I9 347 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 ANKRD53Q8N9V6 530 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 VN1R2Q8NFZ6 395 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 OR5AR1Q8NGP9 310 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 GNPDA2Q8TDQ7 276 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 AIF1LQ9BQI0 150 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 MS4A8Q9BY19 250 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 PAK6Q9NQU5 681 aaPredicted RBP13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 PRKAB1Q9Y478 270 aa13.15□□□□□ -0.3
VPS9D1-202ENST00000561976 TMPRSS11DO60235 418 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 PTBP1P26599 531 aaKnown RBP eCLIP13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 IFNGR2P38484 337 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 GPR1P46091 355 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 DSG2Q14126 1118 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 ZNF658BQ4V348 819 aaPredicted RBP13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 LCTLQ6UWM7 567 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 PRICKLE2Q7Z3G6 844 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 TMCO2Q7Z6W1 182 aaPredicted RBP13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 NUDT13Q86X67 352 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 IQCF2Q8IXL9 164 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 RFKQ969G6 155 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 RAD51AP1Q96B01 352 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 FAM46AQ96IP4 442 aaKnown RBP13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 HYLS1Q96M11 299 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 KCNJ15Q99712 375 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 QRSL1Q9H0R6 528 aaKnown RBP13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 EPHX3Q9H6B9 360 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 SLC28A3Q9HAS3 691 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 CUEDC1Q9NWM3 386 aaPredicted RBP13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 SLC23A1Q9UHI7 598 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 CDH10Q9Y6N8 788 aa13.15□□□□□ -0.31
VPS9D1-202ENST00000561976 SGK494L7N484 410 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 CHST10O43529 356 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 LZTS3O60299 673 aaPredicted RBP13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 BICRALQ6AI39 1079 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 SLC30A6Q6NXT4 461 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 SLC39A11Q8N1S5 342 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 DNAJC5GQ8N7S2 189 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 OR4M2Q8NGB6 313 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 SPRYD4Q8WW59 207 aaPredicted RBP13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 CHFRQ96EP1 664 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 ZDHHC5Q9C0B5 715 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 PTGFRNQ9P2B2 879 aa13.14□□□□□ -0.31
VPS9D1-202ENST00000561976 SLC13A4Q9UKG4 626 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms