RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 MANEAQ5SRI9 462 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 C12orf73Q69YU5 71 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 WDR53Q7Z5U6 358 aaPredicted RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 OOSP2Q86WS3 158 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 VRK2Q86Y07 508 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 STX19Q8N4C7 294 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 MORN4Q8NDC4 146 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 NR4A3Q92570 626 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 ORAI3Q9BRQ5 295 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 TTYH1Q9H313 450 aaPredicted RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 C2orf42Q9NWW7 574 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 PTGFRNQ9P2B2 879 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 SLC13A4Q9UKG4 626 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 EFCAB10A6NFE3 127 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 CHURC1-FNTBB4DL54 471 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 ZIC2O95409 532 aaPredicted RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 TP53P04637 393 aaPredicted RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 IGFBP1P08833 259 aaPredicted RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 PORP16435 677 aaPredicted RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 CD36P16671 472 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 PRKAR1BP31321 381 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 PDX1P52945 283 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 PPP1CAP62136 330 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 SNRPGP62308 76 aaKnown RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 HHEXQ03014 270 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 ST3GAL4Q11206 333 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 IRF3Q14653 427 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 NDUFA9Q16795 377 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 ZNF628Q5EBL2 1059 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 CD300LDQ6UXZ3 194 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 PRSS41Q7RTY9 318 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 PARGQ86W56 976 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 ZNF761Q86XN6 746 aaPredicted RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 RBM12BQ8IXT5 1001 aaKnown RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 CSNK1A1LQ8N752 337 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 SLC16A11Q8NCK7 471 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 B3GNT7Q8NFL0 401 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 OR4K5Q8NGD3 323 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 CDS1Q92903 461 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 SLC38A4Q969I6 547 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 KLHDC7BQ96G42 594 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 SLC6A18Q96N87 628 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 PHF7Q9BWX1 381 aaPredicted RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 TRIM45Q9H8W5 580 aaPredicted RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 CNOT2Q9NZN8 540 aaKnown RBP9.19□□□□□ -0.94
SMG1-205ENST00000561947 SLCO1B1Q9Y6L6 691 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 SPACA6W5XKT8 324 aa9.19□□□□□ -0.94
SMG1-205ENST00000561947 CLDN24A6NM45 220 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 H3BN98 237 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 M0R082 166 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 TPST2O60704 377 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 MMP11P24347 488 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 SOX18P35713 384 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 BLKP51451 505 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 MLLT10P55197 1068 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 COX10Q12887 443 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 TIGD6Q17RP2 521 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ZNF829Q3KNS6 432 aaPredicted RBP9.18□□□□□ -0.94
SMG1-205ENST00000561947 INAVAQ3KP66 663 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 FRRS1Q6ZNA5 592 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 IQCHQ86VS3 1027 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 TMEFF1Q8IYR6 380 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 TSTD1Q8NFU3 115 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 NDNFQ8TB73 568 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ZDHHC1Q8WTX9 485 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 BORCS5Q969J3 196 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ZG16BQ96DA0 208 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 GAS2L1Q99501 681 aaPredicted RBP9.18□□□□□ -0.94
SMG1-205ENST00000561947 IL21RQ9HBE5 538 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 CTPS2Q9NRF8 586 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMG1-205ENST00000561947 GPR55Q9Y2T6 319 aaPredicted RBP9.18□□□□□ -0.94
SMG1-205ENST00000561947 CCDC85CA6NKD9 419 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 GALR3O60755 368 aaPredicted RBP9.18□□□□□ -0.94
SMG1-205ENST00000561947 ADORA3P0DMS8 318 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ACP2P11117 423 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 LIPAP38571 399 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 TAS2R41P59536 307 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 VBP1P61758 197 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 LSM3P62310 102 aaKnown RBP9.18□□□□□ -0.94
SMG1-205ENST00000561947 ID2Q02363 134 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 TMEM201Q5SNT2 666 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 FHL5Q5TD97 284 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ARMC6Q6NXE6 501 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 C1orf94Q6P1W5 598 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ZER1Q7Z7L7 766 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ZBTB46Q86UZ6 589 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 GJD3Q8N144 294 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ZNF687Q8N1G0 1237 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 CA13Q8N1Q1 262 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 SIMC1Q8NDZ2 872 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 OR52P1PQ8NH57 321 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 C9orf43Q8TAL5 461 aaPredicted RBP9.18□□□□□ -0.94
SMG1-205ENST00000561947 FAM174AQ8TBP5 190 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 ZNF675Q8TD23 568 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 TRUB1Q8WWH5 349 aaKnown RBP9.18□□□□□ -0.94
SMG1-205ENST00000561947 RLN3Q8WXF3 142 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 SLC9A6Q92581 669 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 LRRC61Q9BV99 259 aa9.18□□□□□ -0.94
SMG1-205ENST00000561947 SEMA6CQ9H3T2 930 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms