RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 TGFB1P01137 390 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 SLC35E2P0CK97 266 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 NR2F6P10588 404 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 BSGP35613 385 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 BUD31P41223 144 aaPredicted RBP7.69□□□□□ -1.18
PALB2-202ENST00000561514 SERPINB4P48594 390 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 ZNF136P52737 540 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 HERVK_113P63132 956 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 ERVK-8P63133 956 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 CTAG1AP78358 180 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 FUT7Q11130 342 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 DUSP8Q13202 625 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 SLAMF1Q13291 335 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 NAB1Q13506 487 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 RPS6KA2Q15349 733 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 LIN52Q52LA3 116 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 LIPJQ5W064 366 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 C18orf63Q68DL7 685 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 VASNQ6EMK4 673 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 METTL2BQ6P1Q9 378 aaKnown RBP7.69□□□□□ -1.18
PALB2-202ENST00000561514 RNF111Q6ZNA4 994 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 SLC29A4Q7RTT9 530 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 PIGWQ7Z7B1 504 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 ADGRE4PQ86SQ3 457 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 KLHL7Q8IXQ5 586 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 PM20D2Q8IYS1 436 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 TAGAPQ8N103 731 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 L3MBTL4Q8NA19 623 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 TNIP2Q8NFZ5 429 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 HUS1BQ8NHY5 278 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 RHEBL1Q8TAI7 183 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 SPPL2AQ8TCT8 520 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 PPWD1Q96BP3 646 aaKnown RBP7.69□□□□□ -1.18
PALB2-202ENST00000561514 RBM18Q96H35 190 aaKnown RBP7.69□□□□□ -1.18
PALB2-202ENST00000561514 ZIM3Q96PE6 472 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 TIMP4Q99727 224 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 DOHHQ9BU89 302 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 SORBS1Q9BX66 1292 aaKnown RBP7.69□□□□□ -1.18
PALB2-202ENST00000561514 ERVK-6Q9BXR3 956 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 ANGPTL4Q9BY76 406 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 KRTAP3-3Q9BYR6 98 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 KRTAP3-2Q9BYR7 98 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 ALG9Q9H6U8 611 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 LDAHQ9H6V9 325 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 SNX15Q9NRS6 342 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 LYARQ9NX58 379 aaKnown RBP7.69□□□□□ -1.18
PALB2-202ENST00000561514 WHRNQ9P202 907 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 OPTCQ9UBM4 332 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 MTRF1LQ9UGC7 380 aaKnown RBP7.69□□□□□ -1.18
PALB2-202ENST00000561514 RNF112Q9ULX5 631 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 ERVK-19Q9WJR5 959 aa7.69□□□□□ -1.18
PALB2-202ENST00000561514 IQANK1A0A1B0GTG1 560 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 A0A1W2PR48 441 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 FOXE1O00358 373 aaPredicted RBP7.68□□□□□ -1.18
PALB2-202ENST00000561514 TP53I11O14683 189 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 EEDO75530 441 aaKnown RBP7.68□□□□□ -1.18
PALB2-202ENST00000561514 PRKRAO75569 313 aaKnown RBP7.68□□□□□ -1.18
PALB2-202ENST00000561514 SNX4O95219 450 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 ATE1O95260 518 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 AIFM1O95831 613 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 S100BP04271 92 aaPredicted RBP7.68□□□□□ -1.18
PALB2-202ENST00000561514 NAT2P11245 290 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 EPB42P16452 691 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 DRD4P21917 467 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 BMP5P22003 454 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 DNASE1P24855 282 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 CRABP2P29373 138 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 SSTR1P30872 391 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 TLX1P31314 330 aaPredicted RBP7.68□□□□□ -1.18
PALB2-202ENST00000561514 SPRP35270 261 aaPredicted RBP7.68□□□□□ -1.18
PALB2-202ENST00000561514 PAFAH1B1P43034 410 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 PTDSS1P48651 473 aaKnown RBP7.68□□□□□ -1.18
PALB2-202ENST00000561514 PCYT1AP49585 367 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 GPX6P59796 221 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 ADAM8P78325 824 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 ZNF267Q14586 743 aaPredicted RBP7.68□□□□□ -1.18
PALB2-202ENST00000561514 PCBP2Q15366 365 aaKnown RBP eCLIP7.68□□□□□ -1.18
PALB2-202ENST00000561514 SF3B4Q15427 424 aaKnown RBP eCLIP7.68□□□□□ -1.18
PALB2-202ENST00000561514 CEBPEQ15744 281 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 GALNTL6Q49A17 601 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 SMUG1Q53HV7 270 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 GRTP1Q5TC63 336 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 TBC1D1Q86TI0 1168 aaPredicted RBP7.68□□□□□ -1.18
PALB2-202ENST00000561514 KRTAP1-3Q8IUG1 177 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 WDR75Q8IWA0 830 aaKnown RBP7.68□□□□□ -1.18
PALB2-202ENST00000561514 CENPLQ8N0S6 344 aaPredicted RBP7.68□□□□□ -1.18
PALB2-202ENST00000561514 ZNF615Q8N8J6 731 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 WDR20Q8TBZ3 569 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 PYROXD1Q8WU10 500 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 RIT1Q92963 219 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 ADIPOR1Q96A54 375 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 ARL8AQ96BM9 186 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 HSPBAP1Q96EW2 488 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 TMEM41AQ96HV5 264 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 UCN2Q96RP3 112 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 KRT12Q99456 494 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 TRIM31Q9BZY9 425 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 PLEKHF2Q9H8W4 249 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 CALHM2Q9HA72 323 aa7.68□□□□□ -1.18
PALB2-202ENST00000561514 CXorf21Q9HAI6 301 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms