RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 QTRT1Q9BXR0 403 aaKnown RBP3□□□□□ -1.93
SPG11-225ENST00000561391 NLNQ9BYT8 704 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ZYG11BQ9C0D3 744 aa3□□□□□ -1.93
SPG11-225ENST00000561391 SLC25A51Q9H1U9 297 aa3□□□□□ -1.93
SPG11-225ENST00000561391 MMADHCQ9H3L0 296 aaPredicted RBP3□□□□□ -1.93
SPG11-225ENST00000561391 MRM3Q9HC36 420 aaKnown RBP3□□□□□ -1.93
SPG11-225ENST00000561391 G6PC2Q9NQR9 355 aa3□□□□□ -1.93
SPG11-225ENST00000561391 FGFR1OP2Q9NVK5 253 aa3□□□□□ -1.93
SPG11-225ENST00000561391 GPATCH2LQ9NWQ4 482 aa3□□□□□ -1.93
SPG11-225ENST00000561391 P4HTMQ9NXG6 502 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ABI3Q9P2A4 366 aa3□□□□□ -1.93
SPG11-225ENST00000561391 VANGL2Q9ULK5 521 aa3□□□□□ -1.93
SPG11-225ENST00000561391 RNF6Q9Y252 685 aa3□□□□□ -1.93
SPG11-225ENST00000561391 ZNF835Q9Y2P0 537 aa3□□□□□ -1.93
SPG11-225ENST00000561391 L3MBTL1Q9Y468 752 aa3□□□□□ -1.93
SPG11-225ENST00000561391 CAPN7Q9Y6W3 813 aa3□□□□□ -1.93
SPG11-225ENST00000561391 EPPK1P58107 5090 aaKnown RBP3□□□□□ -1.93
SPG11-225ENST00000561391 IGLV3-10A0A075B6K4 115 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 SYNJ2BP-COX16A0A087WUM0 186 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 CXorf51AA0A1B0GTR3 108 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 A0A1W2PPM1 405 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 SLC22A23A1A5C7 686 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 FAM90A20PA6NIJ5 464 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 IDSB3KWA1 339 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 TMEM114B3SHH9 223 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 NPIPA5E9PKD4 350 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 KCNK1O00180 336 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 DFFAO00273 331 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 CHUKO15111 745 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 SLC22A2O15244 555 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 MFSD11O43934 449 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 AVILO75366 819 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 SPAG7O75391 227 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 CLDN11O75508 207 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 ZNF821O75541 412 aaPredicted RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 SCRG1O75711 98 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 KLHL2O95198 593 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 EML2O95834 649 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 PLAUP00749 431 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 SERPINE1P05121 402 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 CAPN1P07384 714 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 BPGMP07738 259 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 CD63P08962 238 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 ANKRD34CP0C6C1 535 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 LYL1P12980 280 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 ACP5P13686 325 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 CPA3P15088 417 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 AMD1P17707 334 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 IDSP22304 550 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 KELP23276 732 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 FOXN2P32314 431 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 ACTR1BP42025 376 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 SLC12A2P55011 1212 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 NR1H2P55055 460 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 ACTR1AP61163 376 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 IRX1P78414 480 aaPredicted RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 SRSF4Q08170 494 aaKnown RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 IL10RBQ08334 325 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 OLIG2Q13516 323 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 ALKBH1Q13686 389 aaKnown RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 THOC5Q13769 683 aaKnown RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 CRYMQ14894 314 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 SNCBQ16143 134 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 MYLK3Q32MK0 819 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 ANKRD20A4Q4UJ75 823 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 RUNDC3AQ59EK9 446 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 CARD16Q5EG05 197 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 RABGAP1LQ5R372 815 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 WASHC2DQ5SRD0 308 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 OTUD1Q5VV17 481 aaPredicted RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 IRAK1BP1Q5VVH5 260 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 MLIPQ5VWP3 458 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 LIPMQ5VYY2 423 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 FAM91A1Q658Y4 838 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 KCTD11Q693B1 232 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 KLC3Q6P597 504 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 ISLR2Q6UXK2 745 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 PACS1Q6VY07 963 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 CERS6Q6ZMG9 384 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 ZNF813Q6ZN06 617 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 Q6ZPB1 254 aaPredicted RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 GALNT7Q86SF2 657 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 SDCCAG8Q86SQ7 713 aaPredicted RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 TAC4Q86UU9 113 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 TMEM126BQ8IUX1 230 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 CNTN4Q8IWV2 1026 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 NDUFAF2Q8N183 169 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 C4orf33Q8N1A6 199 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 PYROXD2Q8N2H3 581 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 C3orf56Q8N813 242 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 SIDT2Q8NBJ9 832 aaKnown RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 ADPRHL1Q8NDY3 354 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 GDAP1Q8TB36 358 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 PHF10Q8WUB8 498 aaKnown RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 ASB5Q8WWX0 329 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 KLHL29Q96CT2 875 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 CERS2Q96G23 380 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 OXNAD1Q96HP4 312 aaPredicted RBP2.99□□□□□ -1.93
SPG11-225ENST00000561391 VPS39Q96JC1 886 aa2.99□□□□□ -1.93
SPG11-225ENST00000561391 ADAD1Q96M93 576 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms