RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SLC52A3Q9NQ40 469 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 DDX18Q9NVP1 670 aaKnown RBP8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 GIN1Q9NXP7 522 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 MAP10Q9P2G4 905 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 DCTN4Q9UJW0 460 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 TRIM33Q9UPN9 1127 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 PCDHGA10Q9Y5H3 936 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 NPFFR2Q9Y5X5 522 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 HELZ2Q9BYK8 2649 aaKnown RBP8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 ZNF407Q9C0G0 2248 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 HEATR5AQ86XA9 2040 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 A0A0G2JND7 137 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 A8MVJ9 347 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 CAPN14A8MX76 684 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 OR6B1O95007 311 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 NKX2-2O95096 273 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 ZCCHC18P0CG32 403 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 CD46P15529 392 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 ABCD3P28288 659 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 LSP1P33241 339 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 GPC1P35052 558 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 CCT3P49368 545 aaKnown RBP8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 TMED10P49755 219 aaKnown RBP8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 POLR2JP52435 117 aaKnown RBP8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 ARFIP2P53365 341 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 NRG3P56975 720 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 STX1BP61266 288 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 PRR5P85299 388 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 OC90Q02509 493 aaPredicted RBP8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 RCAN2Q14206 197 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 CYP27C1Q4G0S4 372 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 ZNF766Q5HY98 468 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 SPINK14Q6IE38 97 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 SLC25A25Q6KCM7 469 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 PAOXQ6QHF9 649 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 BLOC1S3Q6QNY0 202 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 IL20RBQ6UXL0 311 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 RTL4Q6ZR62 310 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 PTRH1Q86Y79 214 aaKnown RBP8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 FUNDC1Q8IVP5 155 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 CLECL1Q8IZS7 167 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 CYP4Z2PQ8N1L4 340 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 CPSF7Q8N684 471 aaKnown RBP8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 CDRT4Q8N9R6 151 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 TMEM178AQ8NBL3 297 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 NUP43Q8NFH3 380 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 OR56A1Q8NGH5 318 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 PAQR8Q8TEZ7 354 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 TSPEARQ8WU66 669 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 TMEM125Q96AQ2 219 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 SPACA9Q96E40 222 aaPredicted RBP8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 MS4A4EQ96PG1 132 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 PHF12Q96QT6 1004 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 OR52E6Q96RD3 313 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 GAL3ST4Q96RP7 486 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 RABEP2Q9H5N1 569 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 CXorf36Q9H7Y0 433 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 HPF1Q9NWY4 346 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 PCDHGB4Q9UN71 923 aa8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 COPG1Q9Y678 874 aaKnown RBP8.88□□□□□ -0.99
RABGGTA-221ENST00000561055 ESPL1Q14674 2120 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 GMNCA6NCL1 334 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 ANKRD33BA6NCL7 494 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 ASPDHA6ND91 283 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 OR6C70A6NIJ9 312 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 NME2P1O60361 137 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 TSPAN2O60636 221 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 ABCB7O75027 752 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 SLC25A12O75746 678 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 PRB1P04280 392 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 HMGN2P05204 90 aaKnown RBP8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 ABCB1P08183 1280 aaPredicted RBP8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 EFNA1P20827 205 aaPredicted RBP8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 NME2P22392 152 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 UQCRC2P22695 453 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 ADSLP30566 484 aaPredicted RBP8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 PRIM2P49643 509 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 DGKQP52824 942 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 PNLIPRP2P54317 469 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 NME5P56597 212 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 CORO7P57737 925 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 C19orf57Q0VDD7 668 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 SQLEQ14534 574 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 MAPKAPK3Q16644 382 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 VPS26BQ4G0F5 336 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 AP1ARQ63HQ0 302 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 SLC22A10Q63ZE4 541 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 MFSD12Q6NUT3 480 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 BHLHB9Q6PI77 547 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 NPSR1Q6W5P4 371 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 NUP54Q7Z3B4 507 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 MDGA2Q7Z553 956 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 SLC34A3Q8N130 599 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 PSD4Q8NDX1 1056 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 OR9I1Q8NGQ6 314 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 DNAJB8Q8NHS0 232 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 FAM110BQ8TC76 370 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 MIPOL1Q8TD10 442 aa8.87□□□□□ -0.99
RABGGTA-221ENST00000561055 RNF138Q8WVD3 245 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms