RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 PPT2Q9UMR5 302 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 NCKAP1Q9Y2A7 1128 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 ASB1Q9Y576 335 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 AUP1Q9Y679 476 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 CFAP20Q9Y6A4 193 aaKnown RBP8.1□□□□□ -1.11
CCDC33-209ENST00000560565 PCM1Q15154 2024 aa8.1□□□□□ -1.11
CCDC33-209ENST00000560565 DSPPQ9NZW4 1301 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 SPTBN2O15020 2390 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 CCDC163A0A0D9SF12 145 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 TRDV1A0A1B0GX56 115 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 A0A1W2PRB8 838 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 C12orf71A8MTZ7 269 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 INMT-MINDY4F8WBC2 141 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 FOXE1O00358 373 aaPredicted RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 CASKO14936 926 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 PLD2O14939 933 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 HRO43593 1189 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 PRAF2O60831 178 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 GJB3O75712 270 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 KLF8O95600 359 aaPredicted RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 APBB3O95704 486 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 WDPCPO95876 746 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 CATP04040 527 aaKnown RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 PDGFAP04085 211 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 ANXA4P09525 319 aaPredicted RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 ARAFP10398 606 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 HLA-EP13747 358 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 HK1P19367 917 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 MAGP20916 626 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 LHCGRP22888 699 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 PPP2R1BP30154 601 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 TIA1P31483 386 aaKnown RBP eCLIP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 XKP51811 444 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 RGS1Q08116 209 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 HNRNPA0Q13151 305 aaKnown RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 CHIT1Q13231 466 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 SLAMF1Q13291 335 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 DSG2Q14126 1118 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 PTPRCAPQ14761 206 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 ZNF79Q15937 498 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 SSX1Q16384 188 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 HNRNPA1L2Q32P51 320 aaKnown RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 SMUG1Q53HV7 270 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 ZNF805Q5CZA5 627 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 ZNF628Q5EBL2 1059 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 NDUFAF5Q5TEU4 345 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 NXNL2Q5VZ03 156 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 REEP3Q6NUK4 255 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 ANGPTL8Q6UXH0 198 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 SLC36A4Q6YBV0 504 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 ZNF730Q6ZMV8 503 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 Q6ZVU0 165 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 SPATC1Q76KD6 591 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 WDR5BQ86VZ2 330 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 AMIGO1Q86WK6 493 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 LAX1Q8IWV1 398 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 PHC2Q8IXK0 858 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 TSTD1Q8NFU3 115 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 OR8H1Q8NGG4 311 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 ASZ1Q8WWH4 475 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 ASB11Q8WXH4 323 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 OR8D1Q8WZ84 308 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 PPCDCQ96CD2 204 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 ERMAPQ96PL5 475 aaPredicted RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 CITED4Q96RK1 184 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 UBL7Q96S82 380 aaPredicted RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 DCLRE1CQ96SD1 692 aaKnown RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 BARD1Q99728 777 aaKnown RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 TMEM43Q9BTV4 400 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 EFCAB11Q9BUY7 163 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 TSSK6Q9BXA6 273 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 PPA2Q9H2U2 334 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 ZDHHC6Q9H6R6 413 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 FBRSQ9HAH7 460 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 LIN7BQ9HAP6 207 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 PRM3Q9NNZ6 103 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 ABCB9Q9NP78 766 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 FGF20Q9NP95 211 aaPredicted RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 TIGARQ9NQ88 270 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 MED17Q9NVC6 651 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 MCUBQ9NWR8 336 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 TXNL4BQ9NX01 149 aaKnown RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 GLTPQ9NZD2 209 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 THAP10Q9P2Z0 257 aaPredicted RBP8.09□□□□□ -1.11
CCDC33-209ENST00000560565 IL36AQ9UHA7 158 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 UBQLN2Q9UHD9 624 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 MMP17Q9ULZ9 603 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 HSPB11Q9Y547 144 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 NUBP2Q9Y5Y2 271 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 FKBP7Q9Y680 259 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 CSNK1G3Q9Y6M4 447 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 EML5Q05BV3 1969 aa8.09□□□□□ -1.11
CCDC33-209ENST00000560565 CNOT1A5YKK6 2376 aaKnown RBP8.08□□□□□ -1.12
CCDC33-209ENST00000560565 CEP192Q8TEP8 1941 aa8.08□□□□□ -1.12
CCDC33-209ENST00000560565 LOC105371267A0A1B0GV96 52 aa8.08□□□□□ -1.12
CCDC33-209ENST00000560565 GNG14A0A1W2PPG7 69 aa8.08□□□□□ -1.12
CCDC33-209ENST00000560565 ANTXRLA6NF34 631 aa8.08□□□□□ -1.12
CCDC33-209ENST00000560565 AGAP14A8MT82 685 aa8.08□□□□□ -1.12
CCDC33-209ENST00000560565 PRRT4C9JH25 899 aa8.08□□□□□ -1.12
CCDC33-209ENST00000560565 C1QTNF3-AMACRE9PGA6 284 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms