RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ERVK-11Q9UQG0 969 aa12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 KLF13Q9Y2Y9 288 aaPredicted RBP12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 COPG1Q9Y678 874 aaKnown RBP12.94□□□□□ -0.34
PKNOX1-209ENST00000560448 CNTRLQ7Z7A1 2325 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 FRG2CA6NGY1 282 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 TTLL8A6PVC2 850 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 KLRC4-KLRK1H3BQV0 150 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 WWP2O00308 870 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 RNASET2O00584 256 aaKnown RBP12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 TO15178 435 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 ABCB7O75027 752 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 SLC25A12O75746 678 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 RASAL1O95294 804 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 PSMG1O95456 288 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 CRYABP02511 175 aaKnown RBP12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 PRB1P04280 392 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 SP1P08047 785 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 FBXO45P0C2W1 286 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 EMDP50402 254 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 MNAT1P51948 309 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 DIO3P55073 304 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 MRPS35P82673 323 aaKnown RBP12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 DUSP2Q05923 314 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 RPS6KA2Q15349 733 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 LTB4RQ15722 352 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 VPS26BQ4G0F5 336 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 PDCD4Q53EL6 469 aaKnown RBP12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 TRMT12Q53H54 448 aaKnown RBP12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 FHL5Q5TD97 284 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 ANXA8L1Q5VT79 327 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 BHLHB9Q6PI77 547 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 FAM111BQ6SJ93 734 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 TMEM64Q6YI46 380 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 POU5F2Q8N7G0 328 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 POGLUT1Q8NBL1 392 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 ADCY4Q8NFM4 1077 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 DNAJB8Q8NHS0 232 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 OR5P2Q8WZ92 322 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 LCORQ96JN0 433 aaPredicted RBP12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 BTBD9Q96Q07 612 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 ZBTB18Q99592 522 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 DUSP26Q9BV47 211 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 MFRPQ9BY79 579 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 PLA2G3Q9NZ20 509 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 BOD1L1Q8NFC6 3051 aa12.93□□□□□ -0.34
PKNOX1-209ENST00000560448 A0A1W2PRB8 838 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 ANKRD28O15084 1053 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 UBDO15205 165 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 SLC28A2O43868 658 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 NME2P1O60361 137 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 MAN1A2O60476 641 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 ATP6V1G2O95670 118 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 NME2P22392 152 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 SOX18P35713 384 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 KIR3DL1P43629 444 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 ATP4BP51164 291 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 ZNHIT3Q15649 155 aaPredicted RBP12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 DNAL1Q4LDG9 190 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 ZNF385BQ569K4 471 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 TBCELQ5QJ74 424 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 FAM180BQ6P0A1 224 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 FAM180AQ6UWF9 173 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 PRICKLE2Q7Z3G6 844 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 BCORP1Q8N888 145 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 CATSPER1Q8NEC5 780 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 OR7G2Q8NG99 324 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 RP9Q8TA86 221 aaKnown RBP12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 SPACA9Q96E40 222 aaPredicted RBP12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 BARD1Q99728 777 aaKnown RBP12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 CLMPQ9H6B4 373 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 SDR39U1Q9NRG7 319 aaPredicted RBP12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 FAM120CQ9NX05 1096 aaKnown RBP12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 ZIM2Q9NZV7 527 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 CNIH4Q9P003 139 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 MRTO4Q9UKD2 239 aaKnown RBP12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 PCDHGB4Q9UN71 923 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 CSAG2Q9Y5P2 127 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 GPR45Q9Y5Y3 372 aa12.92□□□□□ -0.34
PKNOX1-209ENST00000560448 LOC100653049A0A140TA62 436 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 ASPDHA6ND91 283 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 UPK1AO00322 258 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 TP53I11O14683 189 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 ERN1O75460 977 aaKnown RBP12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 KRT34O76011 436 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 NADKO95544 446 aaPredicted RBP12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 IL6P05231 212 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 ALDOCP09972 364 aaKnown RBP12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 LAMP1P11279 417 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 SOX3P41225 446 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 MC3RP41968 323 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 NR0B1P51843 470 aaKnown RBP12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 STX1BP61266 288 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 MRPS22P82650 360 aaKnown RBP12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 HSPB3Q12988 150 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 SQLEQ14534 574 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 NTRK2Q16620 822 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 ZNF791Q3KP31 576 aaPredicted RBP12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 SPINK14Q6IE38 97 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 TMEM81Q6P7N7 255 aa12.91□□□□□ -0.34
PKNOX1-209ENST00000560448 TMEM107Q6UX40 140 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms