RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 MSANTD1Q6ZTZ1 278 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 TREML1Q86YW5 311 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 SLC5A8Q8N695 610 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 Q8NA96 180 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 MDS2Q8NDY4 140 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 CATSPER1Q8NEC5 780 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 NUP43Q8NFH3 380 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 OR4N2Q8NGD1 307 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 OR5AK3PQ8NH89 298 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 ZFP28Q8NHY6 868 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 HAS2Q92819 552 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 HPS1Q92902 700 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 TP53INP1Q96A56 240 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 MAGED4Q96JG8 741 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 ZNF354BQ96LW1 612 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 SIGLEC12Q96PQ1 595 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 OR52E6Q96RD3 313 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 CCDC106Q9BWC9 280 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 PAIP1Q9H074 479 aaKnown RBP8.35□□□□□ -1.07
HMG20A-209ENST00000559728 RNF32Q9H0A6 362 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 SH2D2AQ9NP31 389 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 ZNF71Q9NQZ8 489 aaPredicted RBP8.35□□□□□ -1.07
HMG20A-209ENST00000559728 DDX18Q9NVP1 670 aaKnown RBP8.35□□□□□ -1.07
HMG20A-209ENST00000559728 ANKRD10Q9NXR5 420 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 TAS2R9Q9NYW1 312 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 SLC25A37Q9NYZ2 338 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 STMN3Q9NZ72 180 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 ARMCX1Q9P291 453 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 COPS7AQ9UBW8 275 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 BCAP29Q9UHQ4 241 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 TRIM33Q9UPN9 1127 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 PCDHGB7Q9Y5F8 929 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 KCNE3Q9Y6H6 103 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 ATRXP46100 2492 aa8.35□□□□□ -1.07
HMG20A-209ENST00000559728 C2orf92A0A1B0GVN3 265 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 A0A1W2PP18 115 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 FRG2CA6NGY1 282 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 CAPN14A8MX76 684 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 NR5A2O00482 541 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 ATXN7O15265 892 aaPredicted RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 EMC8O43402 210 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 DYRK3O43781 588 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 BCAS2O75934 225 aaPredicted RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 NKX2-2O95096 273 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 CPSF4O95639 269 aaKnown RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 FAM107AO95990 144 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 IGKV1D-16P01601 117 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 ALPPP05187 535 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 HMGN2P05204 90 aaKnown RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 GSNP06396 782 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 ABCB1P08183 1280 aaPredicted RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 ZCCHC18P0CG32 403 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 DRD5P21918 477 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 GPC1P35052 558 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 SOX3P41225 446 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 PPICP45877 212 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 CCT3P49368 545 aaKnown RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 NR0B1P51843 470 aaKnown RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 STX1BP61266 288 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 AP2B1P63010 937 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 NNATQ16517 81 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 DUSP5Q16690 384 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 LRIF1Q5T3J3 769 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 ANXA8L1Q5VT79 327 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 SAXO2Q658L1 398 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 DLEU7Q6UYE1 221 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 Q6ZS92 163 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 ASB18Q6ZVZ8 466 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 MDGA2Q7Z553 956 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 CPLX4Q7Z7G2 160 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 MTDHQ86UE4 582 aaKnown RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 C10orf111Q8N326 155 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 SLC16A11Q8NCK7 471 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 OR5L2Q8NGL0 311 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 OR4A15Q8NGL6 344 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 C9orf43Q8TAL5 461 aaPredicted RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 SFXN5Q8TD22 340 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 RNF138Q8WVD3 245 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 SPDL1Q96EA4 605 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 OTUB1Q96FW1 271 aaPredicted RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 GAL3ST4Q96RP7 486 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 ZBTB18Q99592 522 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 HES7Q9BYE0 225 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 NEUROD4Q9HD90 331 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 ZCCHC3Q9NUD5 404 aaKnown RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 RALYQ9UKM9 306 aaKnown RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 YARS2Q9Y2Z4 477 aaKnown RBP8.34□□□□□ -1.07
HMG20A-209ENST00000559728 SCN2AQ99250 2005 aa8.34□□□□□ -1.07
HMG20A-209ENST00000559728 PIEZO2Q9H5I5 2752 aa8.33□□□□□ -1.08
HMG20A-209ENST00000559728 RNF103-CHMP3A0A140T963 221 aa8.33□□□□□ -1.08
HMG20A-209ENST00000559728 GXYLT2A0PJZ3 443 aa8.33□□□□□ -1.08
HMG20A-209ENST00000559728 PRAMEF27A3QJZ7 478 aa8.33□□□□□ -1.08
HMG20A-209ENST00000559728 OR5H15A6NDH6 313 aa8.33□□□□□ -1.08
HMG20A-209ENST00000559728 CCDC154A6NI56 674 aa8.33□□□□□ -1.08
HMG20A-209ENST00000559728 FXYD1O00168 92 aa8.33□□□□□ -1.08
HMG20A-209ENST00000559728 CFLARO15519 480 aa8.33□□□□□ -1.08
HMG20A-209ENST00000559728 TSPAN2O60636 221 aa8.33□□□□□ -1.08
HMG20A-209ENST00000559728 COQ9O75208 318 aa8.33□□□□□ -1.08
HMG20A-209ENST00000559728 ERN1O75460 977 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms