RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 WDSUB1Q8N9V3 476 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 C2CD4AQ8NCU7 369 aaPredicted RBP8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 OR5M1Q8NGP8 315 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 TP53INP1Q96A56 240 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 RHBDF1Q96CC6 855 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 OMA1Q96E52 524 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 VPS39Q96JC1 886 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 LCORQ96JN0 433 aaPredicted RBP8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 FAM167BQ9BTA0 163 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 TBCDQ9BTW9 1192 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 MS4A8Q9BY19 250 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 ROGDIQ9GZN7 287 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 NXF5Q9H1B4 397 aaKnown RBP8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 OR51B5Q9H339 312 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 ZFAND3Q9H8U3 227 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 FOLH1BQ9HBA9 442 aa8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 EML4Q9HC35 981 aaKnown RBP8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 EXO1Q9UQ84 846 aaKnown RBP8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 EPN1Q9Y6I3 576 aaPredicted RBP8.03□□□□□ -1.12
SNRPA1-208ENST00000559686 LOC100289279A0A1B0GTE1 492 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 H3BML4 177 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 TCF21O43680 179 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 UGT2B11O75310 529 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 PPM1BO75688 479 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 IPO7O95373 1038 aaKnown RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 GPR75O95800 540 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 CD8AP01732 235 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 AHSGP02765 367 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 PPP3CBP16298 524 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 CD22P20273 847 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 HNF1AP20823 631 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 NT5EP21589 574 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 LORP23490 312 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 GSTM2P28161 218 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 TLX1P31314 330 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 RAP1GDS1P52306 607 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 SUCLG1P53597 346 aaKnown RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 CLDN20P56880 219 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 CDK16Q00536 496 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 LOXL1Q08397 574 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 PLCXD2Q0VAA5 305 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 KIF5AQ12840 1032 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 TBX2Q13207 712 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 ZNF460Q14592 562 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 TSNQ15631 228 aaKnown RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 ZNF672Q499Z4 452 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 PDLIM3Q53GG5 364 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 FAM166AQ6J272 317 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 C4orf22Q6V702 233 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 GPR180Q86V85 440 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 SYCE1Q8N0S2 351 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 AGGF1Q8N302 714 aaeCLIP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 SRFBP1Q8NEF9 429 aaKnown RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 ADCY4Q8NFM4 1077 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 TANKQ92844 425 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 HGDQ93099 445 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 ADIPOR1Q96A54 375 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 C3orf49Q96BT1 292 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 HES6Q96HZ4 224 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 PELOQ9BRX2 385 aaKnown RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 TRAF4Q9BUZ4 470 aaPredicted RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 CACNG6Q9BXT2 260 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 PRRG4Q9BZD6 226 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 OR10A5Q9H207 317 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 C12orf49Q9H741 205 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 NT5DC2Q9H857 520 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 RNF122Q9H9V4 155 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 DNAJC11Q9NVH1 559 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 PTBP2Q9UKA9 531 aaKnown RBP8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 B3GALT5Q9Y2C3 310 aa8.02□□□□□ -1.13
SNRPA1-208ENST00000559686 MAGEB16A2A368 324 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 EFCAB8A8MWE9 144 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 RAMP1O60894 148 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 CDH16O75309 829 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 AQP8O94778 261 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 PLGP00747 810 aaPredicted RBP8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 CCDC175P0C221 793 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 RHOXF2BP0C7M4 288 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 PEPDP12955 493 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 SRD5A2P31213 254 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 BUD31P41223 144 aaPredicted RBP8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 HSPA7P48741 367 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 CTBP2P56545 445 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 CLDN15P56746 228 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 C21orf58P58505 322 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 IRX1P78414 480 aaPredicted RBP8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 DEFA6Q01524 100 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 GGTLC2Q14390 218 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 SQLEQ14534 574 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 EXOSC7Q15024 291 aaKnown RBP8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 SGCBQ16585 318 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 NCMAPQ5T1S8 102 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 C6orf163Q5TEZ5 329 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 RAET1LQ5VY80 246 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 OR4C11Q6IEV9 310 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 FAM214BQ7L5A3 538 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 NUP54Q7Z3B4 507 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 MILR1Q7Z6M3 343 aa8.01□□□□□ -1.13
SNRPA1-208ENST00000559686 GPSM1Q86YR5 675 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms