RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TO15178 435 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 UGT2B11O75310 529 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 GUCY1B2O75343 617 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 CBR3O75828 277 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 CD53P19397 219 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 CNTFP26441 200 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 MAGEA12P43365 314 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 GFRA1P56159 465 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 DUSP2Q05923 314 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 PLCXD2Q0VAA5 305 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 GALNT1Q10472 559 aaPredicted RBP11.9□□□□□ -0.5
TPM1-220ENST00000559556 IFT88Q13099 833 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 TTC19Q6DKK2 380 aaPredicted RBP11.9□□□□□ -0.5
TPM1-220ENST00000559556 SCIMPQ6UWF3 145 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 ENPP6Q6UWR7 440 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 IFNEQ86WN2 208 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 WDSUB1Q8N9V3 476 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 SIMC1Q8NDZ2 872 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 WNT2BQ93097 391 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 ATP6V1E2Q96A05 226 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 ISL2Q96A47 359 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 MRRFQ96E11 262 aaKnown RBP11.9□□□□□ -0.5
TPM1-220ENST00000559556 PHF21BQ96EK2 531 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 C18orf12Q96KH6 178 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 NSUN5Q96P11 429 aaKnown RBP11.9□□□□□ -0.5
TPM1-220ENST00000559556 ACBD3Q9H3P7 528 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 BRF2Q9HAW0 419 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 SERHLQ9NQF3 203 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 BEX4Q9NWD9 120 aaPredicted RBP11.9□□□□□ -0.5
TPM1-220ENST00000559556 BCAP29Q9UHQ4 241 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 PYCARDQ9ULZ3 195 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 PLLPQ9Y342 182 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 FRG2CA6NGY1 282 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 OR6C70A6NIJ9 312 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 ERAL1O75616 437 aaKnown RBP11.89□□□□□ -0.51
TPM1-220ENST00000559556 RPS17P08708 135 aaKnown RBP11.89□□□□□ -0.51
TPM1-220ENST00000559556 CSNK2A2P19784 350 aaPredicted RBP11.89□□□□□ -0.51
TPM1-220ENST00000559556 DEKP35659 375 aaKnown RBP11.89□□□□□ -0.51
TPM1-220ENST00000559556 FEN1P39748 380 aaKnown RBP11.89□□□□□ -0.51
TPM1-220ENST00000559556 PPICP45877 212 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 EMDP50402 254 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 LHX2P50458 406 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 LTBQ06643 244 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 UAP1Q16222 522 aaPredicted RBP11.89□□□□□ -0.51
TPM1-220ENST00000559556 LUZP2Q86TE4 346 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 TRIM42Q8IWZ5 723 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 GCNT2Q8N0V5 402 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 ADCY4Q8NFM4 1077 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 OR4F6Q8NGB9 312 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 OR14L1PQ8NHC6 308 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 RNF138Q8WVD3 245 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 SLC44A1Q8WWI5 657 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 KLHL29Q96CT2 875 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 CNRIP1Q96F85 164 aaPredicted RBP11.89□□□□□ -0.51
TPM1-220ENST00000559556 BTBD9Q96Q07 612 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 LRRC1Q9BTT6 524 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 VPS11Q9H270 941 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 PIGMQ9H3S5 423 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 ELOVL6Q9H5J4 265 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 ACSS3Q9H6R3 686 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 NEUROD4Q9HD90 331 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 FARSBQ9NSD9 589 aaKnown RBP11.89□□□□□ -0.51
TPM1-220ENST00000559556 EHD3Q9NZN3 535 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 XPR1Q9UBH6 696 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 SLC12A4Q9UP95 1085 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 WIF1Q9Y5W5 379 aa11.89□□□□□ -0.51
TPM1-220ENST00000559556 ANK3Q12955 4377 aaKnown RBP11.89□□□□□ -0.51
TPM1-220ENST00000559556 A0A1B0GTL3 188 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 C2orf72A6NCS6 295 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 PLOD2O00469 737 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 HCRTR2O43614 444 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 ABCB7O75027 752 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 PDYNP01213 254 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 RBP1P09455 135 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 DRD5P21918 477 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 CHMP24386 653 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 SRD5A2P31213 254 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 PHBP35232 272 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 CPA2P48052 419 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 PCYT1AP49585 367 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 CLDN18P56856 261 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 MRPS35P82673 323 aaKnown RBP11.88□□□□□ -0.51
TPM1-220ENST00000559556 HMGCS1Q01581 520 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 GAB1Q13480 694 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 POU4F3Q15319 338 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 LTB4RQ15722 352 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 TSNAXIP1Q2TAA8 658 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 TRMT12Q53H54 448 aaKnown RBP11.88□□□□□ -0.51
TPM1-220ENST00000559556 LETMD1Q6P1Q0 360 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 PLXDC2Q6UX71 529 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 ZNF572Q7Z3I7 529 aaPredicted RBP11.88□□□□□ -0.51
TPM1-220ENST00000559556 CXorf67Q86X51 503 aaPredicted RBP11.88□□□□□ -0.51
TPM1-220ENST00000559556 PLCZ1Q86YW0 608 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 GBP7Q8N8V2 638 aaPredicted RBP11.88□□□□□ -0.51
TPM1-220ENST00000559556 OR52R1Q8NGF1 315 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 ZNF675Q8TD23 568 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 INTS12Q96CB8 462 aaKnown RBP11.88□□□□□ -0.51
TPM1-220ENST00000559556 TM4SF18Q96CE8 201 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 DTNBP1Q96EV8 351 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 SLC35A4Q96G79 324 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms