RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.81□□□□□ -1.16
TPM1-213ENST00000558400 SVILO95425 2214 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 F8P00451 2351 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ATP6AP2A0A1C7CYW4 349 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 PRRG2O14669 202 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 PDPK1O15530 556 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 LRRTM2O43300 516 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 AKAP10O43572 662 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ITM2AO43736 263 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 HS6ST1O60243 411 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 SUSD5O60279 629 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 SLC19A2O60779 497 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 SEMA7AO75326 666 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ERN1O75460 977 aaKnown RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 PPM1BO75688 479 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ATP6AP2O75787 350 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 JUNP05412 331 aaKnown RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 ABCB1P08183 1280 aaPredicted RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 CCL3P10147 92 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ESRRAP11474 423 aaPredicted RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 ABOP16442 354 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 BGNP21810 368 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ABCD3P28288 659 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ARRB2P32121 409 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 GPC1P35052 558 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 PTGS2P35354 604 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 HPCAL1P37235 193 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 CA7P43166 264 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 PNLIPRP2P54317 469 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 PSMD4P55036 377 aaKnown RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 WDR4P57081 412 aaKnown RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 KCNK10P57789 538 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 MRPS35P82673 323 aaKnown RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 DUSP2Q05923 314 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 FOXO1Q12778 655 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 PDE7AQ13946 482 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 EFR3AQ14156 821 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 EXOSC7Q15024 291 aaKnown RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 MLC1Q15049 377 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ZNHIT3Q15649 155 aaPredicted RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 LSM12Q3MHD2 195 aaKnown RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 VPS26BQ4G0F5 336 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 CYP27C1Q4G0S4 372 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 RNFT1Q5M7Z0 435 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 CPTPQ5TA50 214 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 IL23RQ5VWK5 629 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 FAM219BQ5XKK7 198 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 SLC30A6Q6NXT4 461 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ZCCHC12Q6PEW1 402 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 Q6ZPB1 254 aaPredicted RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 OR2L13Q8N349 312 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 FAM109AQ8N4B1 249 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ZNF781Q8N8C0 355 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ANKRD42Q8N9B4 389 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 OR10G3Q8NGC4 313 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 SPPL2AQ8TCT8 520 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 KAT2AQ92830 837 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 GFM2Q969S9 779 aaKnown RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 C3orf30Q96M34 536 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 BTBD9Q96Q07 612 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 DOHHQ9BU89 302 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ANGPTL4Q9BY76 406 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 TTTY12Q9BZ98 90 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 GLIPR2Q9H4G4 154 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 MANSC1Q9H8J5 431 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ZDHHC11Q9H8X9 412 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 HHATLQ9HCP6 504 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ZFP64Q9NPA5 681 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 DEPPQ9NTK1 212 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 DDX18Q9NVP1 670 aaKnown RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 ASIC5Q9NY37 505 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 NOP53Q9NZM5 478 aaKnown RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 SUCOQ9UBS9 1254 aaKnown RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 B4GALT7Q9UBV7 327 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ATP6V1HQ9UI12 483 aa7.8□□□□□ -1.16
TPM1-213ENST00000558400 ERRFI1Q9UJM3 462 aaPredicted RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 EXO1Q9UQ84 846 aaKnown RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 CHCHD2Q9Y6H1 151 aaPredicted RBP7.8□□□□□ -1.16
TPM1-213ENST00000558400 CROCCQ5TZA2 2017 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 ZGRF1Q86YA3 2104 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 POLQO75417 2590 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 TRGV8A0A0C4DH27 118 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 OR14I1A6ND48 311 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 OR6C70A6NIJ9 312 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 TRPC5OSA6NMA1 111 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 UPK1AO00322 258 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 CCL21O00585 134 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 HCN1O60741 890 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 SKAP2O75563 359 aaPredicted RBP7.79□□□□□ -1.16
TPM1-213ENST00000558400 REM1O75628 298 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 GLSO94925 669 aaPredicted RBP7.79□□□□□ -1.16
TPM1-213ENST00000558400 LRATO95237 230 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 LDLRP01130 860 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 HOXD4P09016 255 aaPredicted RBP7.79□□□□□ -1.16
TPM1-213ENST00000558400 CT45A8P0DMV1 189 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 CT45A9P0DMV2 189 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 LBPP18428 481 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 ELAVL4P26378 380 aaKnown RBP7.79□□□□□ -1.16
TPM1-213ENST00000558400 SOX18P35713 384 aa7.79□□□□□ -1.16
TPM1-213ENST00000558400 PIGAP37287 484 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms