RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 GPSM1Q86YR5 675 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 WFDC8Q8IUA0 241 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 GALNT12Q8IXK2 581 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 CCDC116Q8IYX3 515 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 ZCCHC7Q8N3Z6 543 aaKnown RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 ZNF615Q8N8J6 731 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 WDSUB1Q8N9V3 476 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 RNF214Q8ND24 703 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 SMAP2Q8WU79 429 aaPredicted RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 HGDQ93099 445 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 FBXW5Q969U6 566 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 CERS2Q96G23 380 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 LCORQ96JN0 433 aaPredicted RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 HS6ST2Q96MM7 605 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 TNFRSF13CQ96RJ3 184 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 NODALQ96S42 347 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 TACO1Q9BSH4 297 aaKnown RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 TMEM204Q9BSN7 226 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 OSBPL11Q9BXB4 747 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 STMN4Q9H169 189 aaPredicted RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 OR10A4Q9H209 315 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 OR51B5Q9H339 312 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 TSPY26PQ9H489 355 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 ALG2Q9H553 416 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 CXorf21Q9HAI6 301 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 NGBQ9NPG2 151 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 PLSCR4Q9NRQ2 329 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 LYARQ9NX58 379 aaKnown RBP4.67□□□□□ -1.66
SPG11-208ENST00000558155 DKKL1Q9UK85 242 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 GUCA1BQ9UMX6 200 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 LIPT1Q9Y234 373 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 GPR52Q9Y2T5 361 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 SNX8Q9Y5X2 465 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 CAPN6Q9Y6Q1 641 aa4.67□□□□□ -1.66
SPG11-208ENST00000558155 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.67□□□□□ -1.665e-6■■■■□ 22.8
SPG11-208ENST00000558155 A0A1W2PP18 115 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 A0A1W2PR48 441 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 PRAMEF25A6NGN4 478 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 GLOD5A6NK44 160 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 WASHC1A8K0Z3 465 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 LINC01387J3KSC0 135 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 ACOX3O15254 700 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 GPRIN2O60269 458 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 DLX3O60479 287 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 CCNT2O60583 730 aaKnown RBP4.66□□□□□ -1.66
SPG11-208ENST00000558155 PRAMEF4O60810 478 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 ADAM11O75078 769 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 PRKRAO75569 313 aaKnown RBP4.66□□□□□ -1.66
SPG11-208ENST00000558155 REM1O75628 298 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 S100BP04271 92 aaPredicted RBP4.66□□□□□ -1.66
SPG11-208ENST00000558155 CD3EP07766 207 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 FAM58BPP0C7Q3 252 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 NR2F6P10588 404 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 PORP16435 677 aaPredicted RBP4.66□□□□□ -1.66
SPG11-208ENST00000558155 EPB42P16452 691 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 SRD5A1P18405 259 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 CD22P20273 847 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 IL11P20809 199 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 NT5EP21589 574 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 DRD5P21918 477 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 DPP4P27487 766 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 CCKARP32238 428 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 CDKN1AP38936 164 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 PTGDSP41222 190 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 PIK3CBP42338 1070 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 XKP51811 444 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 SLC12A2P55011 1212 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 HNRNPH2P55795 449 aaKnown RBP4.66□□□□□ -1.66
SPG11-208ENST00000558155 CTBP2P56545 445 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 DSCR9P59020 149 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 PHEXP78562 749 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 HMGCS1Q01581 520 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 PLCXD2Q0VAA5 305 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 ILF2Q12905 390 aaKnown RBP4.66□□□□□ -1.66
SPG11-208ENST00000558155 SLMAPQ14BN4 828 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 SGCBQ16585 318 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 KCTD19Q17RG1 926 aaPredicted RBP4.66□□□□□ -1.66
SPG11-208ENST00000558155 C6orf52Q5T4I8 152 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 PRAMEF9Q5VWM5 478 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 OR52E8Q6IFG1 317 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 MRM1Q6IN84 353 aaKnown RBP4.66□□□□□ -1.66
SPG11-208ENST00000558155 DNAJC14Q6Y2X3 702 aaPredicted RBP4.66□□□□□ -1.66
SPG11-208ENST00000558155 STAC2Q6ZMT1 411 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 DNM1P46Q6ZS02 220 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 BEND4Q6ZU67 534 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 FAM214BQ7L5A3 538 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 STK32CQ86UX6 486 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 EXOC3L1Q86VI1 746 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 PPIL6Q8IXY8 311 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 LAS2Q8IYD9 372 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 UBQLNLQ8IYU4 475 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 AGGF1Q8N302 714 aaeCLIP4.66□□□□□ -1.66
SPG11-208ENST00000558155 GBP7Q8N8V2 638 aaPredicted RBP4.66□□□□□ -1.66
SPG11-208ENST00000558155 NAT8LQ8N9F0 302 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 OR7G3Q8NG95 312 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 OR4K17Q8NGC6 315 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 OR4K14Q8NGD5 310 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 ROBO4Q8WZ75 1007 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 FIG4Q92562 907 aa4.66□□□□□ -1.66
SPG11-208ENST00000558155 GFM2Q969S9 779 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms