RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PDCL2Q8N4E4 241 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 SPERTQ8NA61 448 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 OR6M1Q8NGM8 313 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 HAS2Q92819 552 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 ATP6V0A1Q93050 837 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 NTNG2Q96CW9 530 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 COG3Q96JB2 828 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 LINC00167Q96N53 147 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 PRAM1Q96QH2 718 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 ATP6V0BQ99437 205 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 SPAG8Q99932 426 aaPredicted RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 TTYH2Q9BSA4 534 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 ACPTQ9BZG2 426 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 KRT23Q9C075 422 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 IQCGQ9H095 443 aaKnown RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 COPS7BQ9H9Q2 264 aaPredicted RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 HPS4Q9NQG7 708 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 ZNF446Q9NWS9 450 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 AATFQ9NY61 560 aaKnown RBP eCLIP2.44□□□□□ -2.02
SPG11-206ENST00000558093 TECRQ9NZ01 308 aaKnown RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 ACTR3BQ9P1U1 418 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 Q9UF83 564 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 MLXQ9UH92 298 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 CIDEBQ9UHD4 219 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 FAM153AQ9UHL3 310 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 LEF1Q9UJU2 399 aaPredicted RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 TRAF3IP3Q9Y228 551 aa2.44□□□□□ -2.02
SPG11-206ENST00000558093 CAB39Q9Y376 341 aaPredicted RBP2.44□□□□□ -2.02
SPG11-206ENST00000558093 FAM205AQ6ZU69 1335 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 IGHV3OR16-12A0A075B7B8 117 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 SH3PXD2BA1X283 911 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 A4D1N5 150 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 SLC15A5A6NIM6 579 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 CCT8L1PA6NM43 557 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 CCDC169A6NNP5 214 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 E7ENQ6 273 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 GPAA1O43292 621 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 NMT2O60551 498 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 NOL3O60936 208 aaKnown RBP2.43□□□□□ -2.02
SPG11-206ENST00000558093 CPNE6O95741 557 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 OPN1MWP04001 364 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 OPN1MW2P0DN77 364 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 OPN1MW3P0DN78 364 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 PRG2P13727 222 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 FASP25445 335 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 SOX6P35712 828 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 HSD17B2P37059 387 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 TNFRSF4P43489 277 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 MEOX2P50222 304 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 NDST1P52848 882 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 GEMP55040 296 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 ASIC1P78348 528 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 HTD2P86397 168 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 CDKL1Q00532 357 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 YWHAHQ04917 246 aaPredicted RBP2.43□□□□□ -2.02
SPG11-206ENST00000558093 OVGP1Q12889 678 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 CCDC57Q2TAC2 916 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 FILIP1LQ4L180 1135 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 FAM219BQ5XKK7 198 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 RTL6Q6ICC9 239 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 ZCCHC12Q6PEW1 402 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 CD164L2Q6UWJ8 174 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 NHLRC1Q6VVB1 395 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 ITIH5Q86UX2 942 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 CCDC65Q8IXS2 484 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 RELL2Q8NC24 303 aaPredicted RBP2.43□□□□□ -2.02
SPG11-206ENST00000558093 BBOF1Q8ND07 529 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 DENND6BQ8NEG7 585 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 AGR3Q8TD06 166 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 CRYGNQ8WXF5 182 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 PNPLA2Q96AD5 504 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 TUBGCP3Q96CW5 907 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 OR5M11Q96RB7 305 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 PAXXQ9BUH6 204 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 NT5C3AQ9H0P0 336 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 ZDHHC6Q9H6R6 413 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 ASB8Q9H765 288 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 Q9HAA7 133 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 ADGRL4Q9HBW9 690 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 CRLF2Q9HC73 371 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 IMPAD1Q9NX62 359 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 TAS2R3Q9NYW6 316 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 NINJ2Q9NZG7 142 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 PRODH2Q9UF12 536 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 HOOK1Q9UJC3 728 aaKnown RBP2.43□□□□□ -2.02
SPG11-206ENST00000558093 SLC9A8Q9Y2E8 581 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 DDX49Q9Y6V7 483 aaKnown RBP2.43□□□□□ -2.02
SPG11-206ENST00000558093 NSD2O96028 1365 aa2.43□□□□□ -2.02
SPG11-206ENST00000558093 ATP8B3O60423 1300 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 AFF2P51816 1311 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 FAM220BPB1ANY3 271 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 F8VZ95 297 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 HDAC3O15379 428 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 MAGEB3O15480 346 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 PSMD3O43242 534 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 PEX11AO75192 247 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 ZNF254O75437 659 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 STBD1O95210 358 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 TRIM16O95361 564 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 ASGR1P07306 291 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms