RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ISCA2Q86U28 154 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 EGFL6Q8IUX8 553 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 SLC38A6Q8IZM9 456 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 OFCC1Q8IZS5 231 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 KIRREL3Q8IZU9 778 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 KBTBD8Q8NFY9 601 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 NANPQ8TBE9 248 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 TMEM143Q96AN5 459 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 SCRN2Q96FV2 425 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 ADGRG7Q96K78 797 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 IFT74Q96LB3 600 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 ANKRD27Q96NW4 1050 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 COPS8Q99627 209 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 SLC30A2Q9BRI3 323 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 SIKE1Q9BRV8 207 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 ZNF747Q9BV97 191 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 TSSK1BQ9BXA7 367 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 PITPNM3Q9BZ71 974 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 HAUS4Q9H6D7 363 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 TMEM185BQ9H7F4 350 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 AUNIPQ9H7T9 357 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 FAM120CQ9NX05 1096 aaKnown RBP3.35□□□□□ -1.87
TDP1-217ENST00000557782 TUBGCP4Q9UGJ1 667 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 NPTNQ9Y639 398 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 COMMD3-BMI1R4GMX3 469 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 TTC3P53804 2025 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 AFF2P51816 1311 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 EVPLQ92817 2033 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 hCG_38984A0A1B0GV85 526 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 A0A1B0GVL5 298 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 SUPT3HB4E1H0 165 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 ABCD4O14678 606 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 NBR2O15453 112 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 DFNA5O60443 496 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 UPK3AO75631 287 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 SORBS2O94875 1100 aaKnown RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 OPN1LWP04000 364 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 UMODP07911 640 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 SLC2A2P11168 524 aaPredicted RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 POU2F1P14859 743 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 DAOP14920 347 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 H2AFXP16104 143 aaPredicted RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 RPL35AP18077 110 aaKnown RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 TBXA2RP21731 343 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 ABCG1P45844 678 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 DVL1P1P54792 670 aaPredicted RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 C21orf59P57076 290 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 RGS8P57771 180 aaPredicted RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 BTG1P62324 171 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 STK11Q15831 433 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 ZNF74Q16587 644 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 XKR7Q5GH72 579 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 C6orf226Q5I0X4 101 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 TCHHL1Q5QJ38 904 aaPredicted RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 CELF3Q5SZQ8 465 aaKnown RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 PIP5KL1Q5T9C9 394 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 MORN5Q5VZ52 161 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 ATL3Q6DD88 541 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 RNASEKQ6P5S7 137 aaKnown RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 VITQ6UXI7 678 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 LEKR1Q6ZMV7 388 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 EIF3MQ7L2H7 374 aaKnown RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 LUZP2Q86TE4 346 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 SPEM1Q8N4L4 309 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 GVQW1Q8N7I0 195 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 ZNF441Q8N8Z8 693 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 Q8N9G6 341 aaPredicted RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 SPERTQ8NA61 448 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 RELL2Q8NC24 303 aaPredicted RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 BBS1Q8NFJ9 593 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 OR4D10Q8NGI6 311 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 OR4D5Q8NGN0 318 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 OR1L3Q8NH93 324 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 FBXO25Q8TCJ0 367 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 LRRC15Q8TF66 581 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 SCFD1Q8WVM8 642 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 DDB2Q92466 427 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 HAVCR1Q96D42 359 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 LRRC39Q96DD0 335 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 C19orf60Q96EN9 201 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 C20orf173Q96LM9 149 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 AMDHD1Q96NU7 426 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 NKX3-1Q99801 234 aaPredicted RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 PSD2Q9BQI7 771 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 CENPKQ9BS16 269 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 TUBGCP2Q9BSJ2 902 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 APOOQ9BUR5 198 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 PAPOLGQ9BWT3 736 aaKnown RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 TDRD1Q9BXT4 1180 aaKnown RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 ALG9Q9H6U8 611 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 EBF2Q9HAK2 575 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 IL1RL2Q9HB29 575 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 ZNF160Q9HCG1 818 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 LZTFL1Q9NQ48 299 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 C2orf42Q9NWW7 574 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 DUS2Q9NX74 493 aaKnown RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 TEX10Q9NXF1 929 aaPredicted RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 ELOVL5Q9NYP7 299 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 GCNT4Q9P109 453 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 ZNF639Q9UID6 485 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms