RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ICOSLGO75144 302 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 BCAS2O75934 225 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-235ENST00000557740 ENO1P06733 434 aaKnown RBP13.35□□□□□ -0.27
SHMT2-235ENST00000557740 CHN1P15882 459 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 DRD5P21918 477 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 GCAP28676 217 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 KRT20P35900 424 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 HTR6P50406 440 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 ART1P52961 327 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 DCST1Q5T197 706 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 DESI1Q6ICB0 168 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 IFT20Q8IY31 132 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 SIMC1Q8NDZ2 872 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 OR9A2Q8NGT5 310 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 OR14L1PQ8NHC6 308 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 NRGNQ92686 78 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 RNASE6Q93091 150 aaKnown RBP13.35□□□□□ -0.27
SHMT2-235ENST00000557740 TMBIM1Q969X1 311 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 TMCO6Q96DC7 493 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 ERP27Q96DN0 273 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 DTNBP1Q96EV8 351 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 ZNF681Q96N22 645 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 COL21A1Q96P44 957 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 SERHLQ9NQF3 203 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 CRIM1Q9NZV1 1036 aa13.35□□□□□ -0.27
SHMT2-235ENST00000557740 PSMC3IPQ9P2W1 217 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-235ENST00000557740 ZNF629Q9UEG4 869 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-235ENST00000557740 FOXD3Q9UJU5 478 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-235ENST00000557740 C2orf72A6NCS6 295 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 CD8B2A6NJW9 211 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 EEF1E1-BLOC1S5C9J1V9 151 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 H0Y3Z8 333 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 GOLGA8RI6L899 631 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 KIF2AO00139 706 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-235ENST00000557740 TO15178 435 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 EEF1E1O43324 174 aaKnown RBP13.34□□□□□ -0.27
SHMT2-235ENST00000557740 ABCB7O75027 752 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 UGT2B11O75310 529 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 REM1O75628 298 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 CTAG2O75638 210 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 ACTL6AO96019 429 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 CYP4B1P13584 511 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 IMPDH1P20839 514 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 TIA1P31483 386 aaKnown RBP eCLIP13.34□□□□□ -0.27
SHMT2-235ENST00000557740 DNAJA1P31689 397 aaKnown RBP13.34□□□□□ -0.27
SHMT2-235ENST00000557740 EMDP50402 254 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 PRKAA2P54646 552 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 NAGLUP54802 743 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 PKNOX1P55347 436 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 PSPHP78330 225 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 HMGCS1Q01581 520 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 HEPACAMQ14CZ8 416 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 FBXL19-AS1Q494R0 122 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 FLYWCH1Q4VC44 716 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 ZNF628Q5EBL2 1059 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 CCDC116Q8IYX3 515 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 FAM9CQ8IZT9 166 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 CEP112Q8N8E3 955 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 ACMSDQ8TDX5 336 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 KAT2AQ92830 837 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 NTNG2Q96CW9 530 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 L3HYPDHQ96EM0 354 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 WDYHV1Q96HA8 205 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 BTBD9Q96Q07 612 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 SH3GL2Q99962 352 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 GPATCH1Q9BRR8 931 aaKnown RBP13.34□□□□□ -0.27
SHMT2-235ENST00000557740 CLEC4MQ9H2X3 399 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-235ENST00000557740 EXO1Q9UQ84 846 aaKnown RBP13.34□□□□□ -0.27
SHMT2-235ENST00000557740 GPR55Q9Y2T6 319 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-235ENST00000557740 NCKAP5O14513 1909 aa13.34□□□□□ -0.27
SHMT2-235ENST00000557740 MBD3L4A6NDZ8 208 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-235ENST00000557740 MBD3L3A6NE82 208 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-235ENST00000557740 OR6C70A6NIJ9 312 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 MBD3L5A6NJ08 208 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-235ENST00000557740 ERN1O75460 977 aaKnown RBP13.33□□□□□ -0.28
SHMT2-235ENST00000557740 CBR3O75828 277 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 GSTA1P08263 222 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 CTSSP25774 331 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 IL12BP29460 328 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 OPRM1P35372 400 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 SOX18P35713 384 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 PTGDSP41222 190 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 ZNF136P52737 540 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 RAE1P78406 368 aaKnown RBP13.33□□□□□ -0.28
SHMT2-235ENST00000557740 EFR3AQ14156 821 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 ENPP6Q6UWR7 440 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 KIF18BQ86Y91 864 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 CNPY4Q8N129 248 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 CCNYL1Q8N7R7 359 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 MBD3L2Q8NHZ7 208 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-235ENST00000557740 CDC26Q8NHZ8 85 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 RDH11Q8TC12 318 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 C16orf78Q8WTQ4 265 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 FAM222BQ8WU58 562 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 RMND5BQ96G75 393 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-235ENST00000557740 APIPQ96GX9 242 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 BBS4Q96RK4 519 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 EBPLQ9BY08 206 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 SHCBP1LQ9BZQ2 653 aa13.33□□□□□ -0.28
SHMT2-235ENST00000557740 OR2B2Q9GZK3 357 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms