RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 PPP6CO00743 305 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 ERN1O75460 977 aaKnown RBP14.49□□□□□ -0.09
SCFD1-224ENST00000557713 PDYNP01213 254 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 CNTFP26441 200 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 ENPP6Q6UWR7 440 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 PLXDC2Q6UX71 529 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 RPS27LQ71UM5 84 aaKnown RBP14.49□□□□□ -0.09
SCFD1-224ENST00000557713 ZNF572Q7Z3I7 529 aaPredicted RBP14.49□□□□□ -0.09
SCFD1-224ENST00000557713 OR52R1Q8NGF1 315 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 OR14L1PQ8NHC6 308 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 WNT2BQ93097 391 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 CNRIP1Q96F85 164 aaPredicted RBP14.49□□□□□ -0.09
SCFD1-224ENST00000557713 LRRC1Q9BTT6 524 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 FUT8Q9BYC5 575 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 BRF2Q9HAW0 419 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 GALNT8Q9NY28 637 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 NINJ2Q9NZG7 142 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 EHD3Q9NZN3 535 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 KLRF1Q9NZS2 232 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 XPR1Q9UBH6 696 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 PSME2Q9UL46 239 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 GPR55Q9Y2T6 319 aaPredicted RBP14.49□□□□□ -0.09
SCFD1-224ENST00000557713 FLNAP21333 2647 aaKnown RBP14.48□□□□□ -0.09
SCFD1-224ENST00000557713 DOCK7Q96N67 2140 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 MPDZO75970 2070 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 PRAMEF25A6NGN4 478 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 OR6C70A6NIJ9 312 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 H0Y3Z8 333 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 SMIM24O75264 130 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 RPS17P08708 135 aaKnown RBP14.48□□□□□ -0.09
SCFD1-224ENST00000557713 COL6A2P12110 1019 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 CD53P19397 219 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 CASQ1P31415 396 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 PHBP35232 272 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 STARP49675 285 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 TRA2BP62995 288 aaKnown RBP14.48□□□□□ -0.09
SCFD1-224ENST00000557713 HMGCS1Q01581 520 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 SLC7A5Q01650 507 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 SRYQ05066 204 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 LTB4RQ15722 352 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 FAM180BQ6P0A1 224 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 LETMD1Q6P1Q0 360 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 LUZP2Q86TE4 346 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 BIVMQ86UB2 503 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 PLCZ1Q86YW0 608 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 KRTAP1-3Q8IUG1 177 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 TMEM151AQ8N4L1 468 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 RDH11Q8TC12 318 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 ZNF483Q8TF39 744 aaPredicted RBP14.48□□□□□ -0.09
SCFD1-224ENST00000557713 INTS12Q96CB8 462 aaKnown RBP14.48□□□□□ -0.09
SCFD1-224ENST00000557713 KLHL29Q96CT2 875 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 COL21A1Q96P44 957 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 TAS2R10Q9NYW0 307 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 CLCF1Q9UBD9 225 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 PRODH2Q9UF12 536 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 ZNF225Q9UK10 706 aa14.48□□□□□ -0.09
SCFD1-224ENST00000557713 MRPS18CQ9Y3D5 142 aaKnown RBP14.48□□□□□ -0.09
SCFD1-224ENST00000557713 FRG2CA6NGY1 282 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 A8MXE2 369 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 OTCP00480 354 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 SBK3P0C264 359 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 PCSK2P16519 638 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 SRD5A2P31213 254 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 LHX2P50458 406 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 CDH13P55290 713 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 MRPS35P82673 323 aaKnown RBP14.47□□□□□ -0.09
SCFD1-224ENST00000557713 GAB1Q13480 694 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 TSNAXIP1Q2TAA8 658 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 FAM219BQ5XKK7 198 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 RELL1Q8IUW5 271 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 C1orf52Q8N6N3 182 aaKnown RBP14.47□□□□□ -0.09
SCFD1-224ENST00000557713 SELENOMQ8WWX9 145 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 SMPDL3BQ92485 455 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 TMBIM1Q969X1 311 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 TMCO6Q96DC7 493 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 SLC35A4Q96G79 324 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 MRPL57Q9BQC6 102 aaKnown RBP14.47□□□□□ -0.09
SCFD1-224ENST00000557713 C1QTNF3Q9BXJ4 246 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 PIGMQ9H3S5 423 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 NEUROD4Q9HD90 331 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 NMRK1Q9NWW6 199 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 HEY2Q9UBP5 337 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 SNX6Q9UNH7 406 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 ZNF780BQ9Y6R6 833 aa14.47□□□□□ -0.09
SCFD1-224ENST00000557713 SH3D21A4FU49 640 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 PLOD2O00469 737 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 ZIC3O60481 467 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 TSPAN2O60636 221 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 REM1O75628 298 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 BCAS2O75934 225 aaPredicted RBP14.46□□□□□ -0.09
SCFD1-224ENST00000557713 CT45A8P0DMV1 189 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 CT45A9P0DMV2 189 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 ZNF708P17019 499 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 TSPAN8P19075 237 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 CHMP24386 653 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 ALDH9A1P49189 494 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 CLDN18P56856 261 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 EEF1A1P68104 462 aaKnown RBP14.46□□□□□ -0.09
SCFD1-224ENST00000557713 POU4F3Q15319 338 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 CT45A2Q5DJT8 189 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms