RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 TMEM145Q8NBT3 493 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 ZNF740Q8NDX6 193 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 NLGN4YQ8NFZ3 816 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-232ENST00000557487 SUN3Q8TAQ9 357 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 AKAP1Q92667 903 aaKnown RBP eCLIP15.35■□□□□ 0.05
SHMT2-232ENST00000557487 COQ10AQ96MF6 247 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 PINK1Q9BXM7 581 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 WASH6PQ9NQA3 447 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 GPR34Q9UPC5 381 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 CLCA2Q9UQC9 943 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 NEDD8-MDP1E9PL57 170 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 ERVH48-1M5A8F1 160 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 SYT5O00445 386 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 B4GALT2O60909 372 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 OR2B3O76000 313 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 IFNA8P32881 189 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 SLC1A3P43003 542 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 SHHQ15465 462 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 HACD4Q5VWC8 232 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 TYW3Q6IPR3 259 aaKnown RBP15.35■□□□□ 0.05
SHMT2-232ENST00000557487 TMEM64Q6YI46 380 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 ZNF782Q6ZMW2 699 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-232ENST00000557487 TRAPPC5Q8IUR0 188 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 CADM2Q8N3J6 435 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 KLHL36Q8N4N3 616 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 MARVELD3Q96A59 401 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 TM9SF2Q99805 663 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 SAP130Q9H0E3 1048 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 OR51I1Q9H343 314 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 TOR4AQ9NXH8 423 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 CARD8Q9Y2G2 431 aa15.35■□□□□ 0.05
SHMT2-232ENST00000557487 A0A0G2JPF8 293 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 HNRNPCL2B2RXH8 293 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 HNRNPCL3B7ZW38 293 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 HPGDSO60760 199 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 EFCAB14O75071 495 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 HNRNPCL4P0DMR1 293 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 OR12D1P0DN82 309 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 ERGP11308 486 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 ARSBP15848 533 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 ABATP80404 500 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 RPA4Q13156 261 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 C9orf50Q5SZB4 431 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 TRILQ7L0X0 811 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 DCUN1D3Q8IWE4 304 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 FAM109AQ8N4B1 249 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 OR2L2Q8NH16 312 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 SFXN5Q8TD22 340 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 HERVK_113Q902F9 699 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 IRF7Q92985 503 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 RGMAQ96B86 450 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 KCTD12Q96CX2 325 aaKnown RBP15.34■□□□□ 0.05
SHMT2-232ENST00000557487 SORBS1Q9BX66 1292 aaKnown RBP15.34■□□□□ 0.05
SHMT2-232ENST00000557487 BEX2Q9BXY8 128 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 PTTG3PQ9NZH4 202 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 CBLCQ9ULV8 474 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 EXOGQ9Y2C4 368 aaKnown RBP15.34■□□□□ 0.05
SHMT2-232ENST00000557487 YARS2Q9Y2Z4 477 aaKnown RBP15.34■□□□□ 0.05
SHMT2-232ENST00000557487 DNAH12Q6ZR08 3092 aa15.34■□□□□ 0.05
SHMT2-232ENST00000557487 M0R3H8 397 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 CRYZL1O95825 349 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 RPN2P04844 631 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 HK1P19367 917 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 SSTR4P31391 388 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 ATP12AP54707 1039 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 GPLD1P80108 840 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 TRAM2Q15035 370 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 SYPL1Q16563 259 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 SYT14Q8NB59 555 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 NEIL3Q8TAT5 605 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 DNAJA4Q8WW22 397 aaPredicted RBP15.33■□□□□ 0.05
SHMT2-232ENST00000557487 SLC9A6Q92581 669 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 OSTF1Q92882 214 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 SNAPC3Q92966 411 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 MOAP1Q96BY2 351 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 MRGPRX3Q96LB0 322 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 SLC46A2Q9BY10 475 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 ZDHHC5Q9C0B5 715 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 MKRN2Q9H000 416 aaKnown RBP15.33■□□□□ 0.05
SHMT2-232ENST00000557487 KCNN2Q9H2S1 579 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 SERHL2Q9H4I8 314 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 B3GNT2Q9NY97 397 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 LIPT1Q9Y234 373 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 ITM2BQ9Y287 266 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 CDH10Q9Y6N8 788 aa15.33■□□□□ 0.05
SHMT2-232ENST00000557487 CCDC88CQ9P219 2028 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 INMT-MINDY4F8WBC2 141 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 VEGFDO43915 354 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 IGHA1P01876 353 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 CTSLP07711 333 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 ACRP10323 421 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 LAG3P18627 525 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 M6PRP20645 277 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 DDX6P26196 483 aaKnown RBP eCLIP15.33■□□□□ 0.043e-6■□□□□ 9.6
SHMT2-232ENST00000557487 STAT5AP42229 794 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 OR3A3P47888 321 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 CCR8P51685 355 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 CDH11P55287 796 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 REEP5Q00765 189 aa15.33■□□□□ 0.04
SHMT2-232ENST00000557487 BTBD16Q32M84 506 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms