RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 QPCTLQ9NXS2 382 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 JKAMPQ9P055 326 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 KIF17Q9P2E2 1029 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 COPS7AQ9UBW8 275 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 TRPS1Q9UHF7 1281 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 DAPP1Q9UN19 280 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 SLC22A14Q9Y267 594 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 MAD1L1Q9Y6D9 718 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 CHCHD2Q9Y6H1 151 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-207ENST00000557470 KCNE2Q9Y6J6 123 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 A0A088AWK7 358 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 SH3D21A4FU49 640 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 MBD3L4A6NDZ8 208 aaPredicted RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 MBD3L3A6NE82 208 aaPredicted RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 NPEPPSL1A6NEC2 478 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 MBD3L5A6NJ08 208 aaPredicted RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 HRKO00198 91 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 DOK2O60496 412 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 SMPD2O60906 423 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 TRIM3O75382 744 aaPredicted RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 HSPA4LO95757 839 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 FGGP02679 453 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 AHSGP02765 367 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 IGKV3-11P04433 115 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 GSNP06396 782 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 THBDP07204 575 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 ENO2P09104 434 aaPredicted RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 CCDC175P0C221 793 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 MTHFD2P13995 350 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 ALOX15P16050 662 aaPredicted RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 TNNI3P19429 210 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 ZNF10P21506 573 aaPredicted RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 CTSSP25774 331 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 CD40P25942 277 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 GDF1P27539 372 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 OPRM1P35372 400 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 SERPINF1P36955 418 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 MTTPP55157 894 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 SERTAD2Q14140 314 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 SLBPQ14493 270 aaKnown RBP eCLIP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 CRYMQ14894 314 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 DPY19L1Q2PZI1 675 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 C18orf21Q32NC0 220 aaPredicted RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 ADPRMQ3LIE5 342 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 DCST1Q5T197 706 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 BICRALQ6AI39 1079 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 ADNP2Q6IQ32 1131 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 TMIGD1Q6UXZ0 262 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 YTHDF3Q7Z739 585 aaKnown RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 MOGAT3Q86VF5 341 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 LRRC75A-AS1Q8N1F1 130 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 TXLNBQ8N3L3 684 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 RASGEF1CQ8N431 466 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 RNF152Q8N8N0 203 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 C9orf106Q8NAJ2 232 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 MCUQ8NE86 351 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 TTLQ8NG68 377 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 OR2L5Q8NG80 312 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 MBD3L2Q8NHZ7 208 aaPredicted RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 NUBPLQ8TB37 319 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 SLC22A8Q8TCC7 542 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 SMPDL3BQ92485 455 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 ANKRD9Q96BM1 317 aaPredicted RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 PERPQ96FX8 193 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 SENP5Q96HI0 755 aaPredicted RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 SIGLEC10Q96LC7 697 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 DACH2Q96NX9 599 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 TRIB1Q96RU8 372 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 PIP5K1AQ99755 562 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 MAPKAP1Q9BPZ7 522 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 DOHHQ9BU89 302 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 BDH2Q9BUT1 245 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 RBM24Q9BX46 236 aaKnown RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 TXLNGYQ9BZA5 131 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 REXO4Q9GZR2 422 aaKnown RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 PRDM14Q9GZV8 571 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 GHITMQ9H3K2 345 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 IPPKQ9H8X2 491 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 COPS7BQ9H9Q2 264 aaPredicted RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 XAB2Q9HCS7 855 aaKnown RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 GALNT8Q9NY28 637 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 SLC17A6Q9P2U8 582 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 CNOT11Q9UKZ1 510 aaKnown RBP5.34□□□□□ -1.55
VPS33B-207ENST00000557470 CAMK2AQ9UQM7 478 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 SLC6A5Q9Y345 797 aa5.34□□□□□ -1.55
VPS33B-207ENST00000557470 CD8B2A6NJW9 211 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 CDC7O00311 574 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 FGF17O60258 216 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 ERN1O75460 977 aaKnown RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 CRLF1O75462 422 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 TRAPPC6AO75865 159 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 URI1O94763 535 aaPredicted RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 WDR47O94967 919 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 ACSL3O95573 720 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 IL18BPO95998 194 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 KRT14P02533 472 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 C1QAP02745 245 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 TMIGD3P0DMS9 266 aaPredicted RBP5.33□□□□□ -1.56
VPS33B-207ENST00000557470 C1GALT1C1LP0DN25 315 aa5.33□□□□□ -1.56
VPS33B-207ENST00000557470 COX7A2P14406 83 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms