RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 ZNF835Q9Y2P0 537 aa7.23□□□□□ -1.25
PSEN1-222ENST00000557356 PCDHGB3Q9Y5G1 929 aa7.23□□□□□ -1.25
PSEN1-222ENST00000557356 CHCHD2Q9Y6H1 151 aaPredicted RBP7.23□□□□□ -1.25
PSEN1-222ENST00000557356 CFAP47Q6ZTR5 3102 aa7.23□□□□□ -1.25
PSEN1-222ENST00000557356 CPAMD8Q8IZJ3 1885 aa7.23□□□□□ -1.25
PSEN1-222ENST00000557356 CNTRLQ7Z7A1 2325 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 TRGV8A0A0C4DH27 118 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 A0A1W2PRB8 838 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 A0A1W2PS29 197 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 WIPF3A6NGB9 483 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 TMEM233B4DJY2 109 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 FAM47E-STBD1D6RA91 191 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 UPK1AO00322 258 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 CCL21O00585 134 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 SCAMP2O15127 329 aaKnown RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 HDAC3O15379 428 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 LRRTM2O43300 516 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 EMC8O43402 210 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 AKAP10O43572 662 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 CBR3O75828 277 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 KCNH1O95259 989 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 CCL3P10147 92 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 AGAP20933 346 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 TACR1P25103 407 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 PIGAP37287 484 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 CASP3P42574 277 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 FRKP42685 505 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 CA7P43166 264 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 MASP1P48740 699 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 PRIM2P49643 509 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 ST13P50502 369 aaKnown RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 CLNS1AP54105 237 aaKnown RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 WDR4P57081 412 aaKnown RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 KCNK10P57789 538 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 MRPS35P82673 323 aaKnown RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 PMP22Q01453 160 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 BST1Q10588 318 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 TP53BP2Q13625 1128 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 LTB4RQ15722 352 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 PDCD2Q16342 344 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 ANXA8L1Q5VT79 327 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 XKRXQ6PP77 449 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 RPTNQ6XPR3 784 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 WDR75Q8IWA0 830 aaKnown RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 SLC44A2Q8IWA5 706 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 ZNF781Q8N8C0 355 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 CDRT4Q8N9R6 151 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 OR7G2Q8NG99 324 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 OR10G3Q8NGC4 313 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 DOK4Q8TEW6 326 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 OR5P2Q8WZ92 322 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 GFM2Q969S9 779 aaKnown RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 MOAP1Q96BY2 351 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 SARAFQ96BY9 339 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 OMA1Q96E52 524 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 SLC35A4Q96G79 324 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 TMEM41AQ96HV5 264 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 ZNF597Q96LX8 424 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 C3orf30Q96M34 536 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 VSTM2LQ96N03 204 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 ITPAQ9BY32 194 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 TTTY12Q9BZ98 90 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 DPY30Q9C005 99 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 BHLHE41Q9C0J9 482 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 LDAHQ9H6V9 325 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 EXO5Q9H790 373 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 ZDHHC11Q9H8X9 412 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 MEAF6Q9HAF1 191 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 NEUROD4Q9HD90 331 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 DEPPQ9NTK1 212 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 GIN1Q9NXP7 522 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 NTMQ9P121 344 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 CNOT11Q9UKZ1 510 aaKnown RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 EXO1Q9UQ84 846 aaKnown RBP7.22□□□□□ -1.25
PSEN1-222ENST00000557356 PTGDR2Q9Y5Y4 395 aa7.22□□□□□ -1.25
PSEN1-222ENST00000557356 NBEAQ8NFP9 2946 aa7.21□□□□□ -1.25
PSEN1-222ENST00000557356 TRGV5A0A0B4J1U4 118 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 A0A1B0GTH9 108 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 A0A1B0GVC2 190 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 DUXAA6NLW8 204 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 E9PLN8 166 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 CFLARO15519 480 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 CDC40O60508 579 aaKnown RBP eCLIP7.21□□□□□ -1.26
PSEN1-222ENST00000557356 ZNF354AO60765 605 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-222ENST00000557356 SNNO75324 88 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-222ENST00000557356 SEMA7AO75326 666 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 GLSO94925 669 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-222ENST00000557356 LRATO95237 230 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 TGDSO95455 350 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 IGHG3P01860 377 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 CT45A8P0DMV1 189 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 CT45A9P0DMV2 189 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 GABRA1P14867 456 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 H2AFXP16104 143 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-222ENST00000557356 ARRB2P32121 409 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 PTGER4P35408 488 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 MC3RP41968 323 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 DNASE1L1P49184 302 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 MAN2A2P49641 1150 aa7.21□□□□□ -1.26
PSEN1-222ENST00000557356 PSG6Q00889 435 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms