RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 SLC6A5Q9Y345 797 aa12.94□□□□□ -0.34
SNX6-210ENST00000557341 MAP1AP78559 2803 aaPredicted RBP12.94□□□□□ -0.34
SNX6-210ENST00000557341 C2CD3Q4AC94 2353 aa12.94□□□□□ -0.34
SNX6-210ENST00000557341 ITPR3Q14573 2671 aa12.94□□□□□ -0.34
SNX6-210ENST00000557341 PRAMEF25A6NGN4 478 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 GOLGA8RI6L899 631 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 TO15178 435 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 UGT2B11O75310 529 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 CHN1P15882 459 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 BMP7P18075 431 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 DRD5P21918 477 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 TIA1P31483 386 aaKnown RBP eCLIP12.93□□□□□ -0.34
SNX6-210ENST00000557341 UQCRC1P31930 480 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 GSTM5P46439 218 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 EMDP50402 254 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 PRKAA2P54646 552 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 WNT3P56703 355 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 ERCC6LQ2NKX8 1250 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 EIPR1Q53HC9 387 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 ZNF628Q5EBL2 1059 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 WIPI1Q5MNZ9 446 aaPredicted RBP12.93□□□□□ -0.34
SNX6-210ENST00000557341 DCST1Q5T197 706 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 NSUN5P2Q63ZY6 315 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 FAM83FQ8NEG4 500 aaPredicted RBP12.93□□□□□ -0.34
SNX6-210ENST00000557341 OR9A2Q8NGT5 310 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 KIF18AQ8NI77 898 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 EXOSC8Q96B26 276 aaKnown RBP12.93□□□□□ -0.34
SNX6-210ENST00000557341 ERP27Q96DN0 273 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 CCDC126Q96EE4 140 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 BTBD9Q96Q07 612 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 NODALQ96S42 347 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 SHCBP1LQ9BZQ2 653 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 GALNT9Q9HCQ5 603 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 SENP1Q9P0U3 644 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 ZNF629Q9UEG4 869 aaPredicted RBP12.93□□□□□ -0.34
SNX6-210ENST00000557341 MAPRE3Q9UPY8 281 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 MPDZO75970 2070 aa12.93□□□□□ -0.34
SNX6-210ENST00000557341 OR6C70A6NIJ9 312 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 CD8B2A6NJW9 211 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 KDM4EB2RXH2 506 aaPredicted RBP12.92□□□□□ -0.34
SNX6-210ENST00000557341 ABCB7O75027 752 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 ICOSLGO75144 302 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 ACTL6AO96019 429 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 PYGBP11216 843 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 PTGDSP41222 190 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 KIR2DL3P43628 341 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 PSPHP78330 225 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 RAE1P78406 368 aaKnown RBP12.92□□□□□ -0.34
SNX6-210ENST00000557341 HMGCS1Q01581 520 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 AKAP6Q13023 2319 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 RCAN2Q14206 197 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 FBXL19-AS1Q494R0 122 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 DESI1Q6ICB0 168 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 GALNT18Q6P9A2 607 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 YRDCQ86U90 279 aaKnown RBP12.92□□□□□ -0.34
SNX6-210ENST00000557341 ZZZ3Q8IYH5 903 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 CCDC116Q8IYX3 515 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 RNASE6Q93091 150 aaKnown RBP12.92□□□□□ -0.34
SNX6-210ENST00000557341 ABTB1Q969K4 478 aaPredicted RBP12.92□□□□□ -0.34
SNX6-210ENST00000557341 TMBIM1Q969X1 311 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 TMCO6Q96DC7 493 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 DTNBP1Q96EV8 351 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 APIPQ96GX9 242 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 COL21A1Q96P44 957 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 TRIB1Q96RU8 372 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 SH3GL2Q99962 352 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 EBPLQ9BY08 206 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 PCNX3Q9H6A9 2034 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 TBK1Q9UHD2 729 aa12.92□□□□□ -0.34
SNX6-210ENST00000557341 FOXD3Q9UJU5 478 aaPredicted RBP12.92□□□□□ -0.34
SNX6-210ENST00000557341 EXO1Q9UQ84 846 aaKnown RBP12.92□□□□□ -0.34
SNX6-210ENST00000557341 GPR55Q9Y2T6 319 aaPredicted RBP12.92□□□□□ -0.34
SNX6-210ENST00000557341 MBD3L4A6NDZ8 208 aaPredicted RBP12.91□□□□□ -0.34
SNX6-210ENST00000557341 MBD3L3A6NE82 208 aaPredicted RBP12.91□□□□□ -0.34
SNX6-210ENST00000557341 MBD3L5A6NJ08 208 aaPredicted RBP12.91□□□□□ -0.34
SNX6-210ENST00000557341 GLRA3O75311 464 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 ERN1O75460 977 aaKnown RBP12.91□□□□□ -0.34
SNX6-210ENST00000557341 CD1EP15812 388 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 IL12BP29460 328 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 KRT20P35900 424 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 ZNF136P52737 540 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 NAGLUP54802 743 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 ZNF763Q0D2J5 394 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 SLC29A2Q14542 456 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 CEBPEQ15744 281 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 FLYWCH1Q4VC44 716 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 IFNEQ86WN2 208 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 FAM9CQ8IZT9 166 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 OR14L1PQ8NHC6 308 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 MBD3L2Q8NHZ7 208 aaPredicted RBP12.91□□□□□ -0.34
SNX6-210ENST00000557341 C16orf78Q8WTQ4 265 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 MZB1Q8WU39 189 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 KAT2AQ92830 837 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 C11orf24Q96F05 449 aaPredicted RBP12.91□□□□□ -0.34
SNX6-210ENST00000557341 SLC35A4Q96G79 324 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 WDYHV1Q96HA8 205 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 KCNA7Q96RP8 456 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 OR2B2Q9GZK3 357 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 GSTO2Q9H4Y5 243 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 ANKRA2Q9H9E1 313 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms