RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 LRRC8CQ8TDW0 803 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 DYDC1Q8WWB3 177 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 OR5P2Q8WZ92 322 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 DIO2Q92813 273 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 OMA1Q96E52 524 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 MAGED4Q96JG8 741 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 VSTM2LQ96N03 204 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 C7orf26Q96N11 449 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 BHLHE41Q9C0J9 482 aaPredicted RBP9.83□□□□□ -0.84
LINC00239-201ENST00000556973 IL1RL2Q9HB29 575 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 INTS9Q9NV88 658 aaKnown RBP9.83□□□□□ -0.84
LINC00239-201ENST00000556973 CNOT11Q9UKZ1 510 aaKnown RBP9.83□□□□□ -0.84
LINC00239-201ENST00000556973 CNTRLQ7Z7A1 2325 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 CLEC18AA5D8T8 446 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 OR6C70A6NIJ9 312 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 ACOT7O00154 380 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 SDHDO14521 159 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 TFECO14948 347 aaPredicted RBP9.82□□□□□ -0.84
LINC00239-201ENST00000556973 EMC8O43402 210 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 HS6ST1O60243 411 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 ABCB7O75027 752 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 WISP2O76076 250 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 GLSO94925 669 aaPredicted RBP9.82□□□□□ -0.84
LINC00239-201ENST00000556973 SNX4O95219 450 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 LAMP1P11279 417 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 KRT20P35900 424 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 RFC3P40938 356 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 DNASE1L1P49184 302 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 PNLIPRP2P54317 469 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 PRKAG1P54619 331 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 DIO3P55073 304 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 KCNK10P57789 538 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 PPIAP62937 165 aaKnown RBP9.82□□□□□ -0.84
LINC00239-201ENST00000556973 KCNJ2P63252 427 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 PSG6Q00889 435 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 PLCXD2Q0VAA5 305 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 FOXO1Q12778 655 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 NNATQ16517 81 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.82□□□□□ -0.84
LINC00239-201ENST00000556973 TMEM198Q66K66 360 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 TMEM81Q6P7N7 255 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 ZCCHC12Q6PEW1 402 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 PAOXQ6QHF9 649 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 CLEC18BQ6UXF7 455 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 SLC22A16Q86VW1 577 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 SLC44A2Q8IWA5 706 aaPredicted RBP9.82□□□□□ -0.84
LINC00239-201ENST00000556973 SLC34A3Q8N130 599 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 GHDCQ8N2G8 530 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 FAM26EQ8N5C1 309 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 KRTCAP2Q8N6L1 136 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 CLEC18CQ8NCF0 446 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 NUP43Q8NFH3 380 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 OR52N2Q8NGI0 321 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 TMCO6Q96DC7 493 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 MAELQ96JY0 434 aaKnown RBP9.82□□□□□ -0.84
LINC00239-201ENST00000556973 COL21A1Q96P44 957 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 DUSP26Q9BV47 211 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 ANGPTL4Q9BY76 406 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 TTTY12Q9BZ98 90 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 DPY30Q9C005 99 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 WDR55Q9H6Y2 383 aaPredicted RBP9.82□□□□□ -0.84
LINC00239-201ENST00000556973 PROK2Q9HC23 129 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 ZNF446Q9NWS9 450 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 NTMQ9P121 344 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 MARCOQ9UEW3 520 aaPredicted RBP9.82□□□□□ -0.84
LINC00239-201ENST00000556973 BOKQ9UMX3 212 aaPredicted RBP9.82□□□□□ -0.84
LINC00239-201ENST00000556973 OSGIN2Q9Y236 505 aa9.82□□□□□ -0.84
LINC00239-201ENST00000556973 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.82□□□□□ -0.84
LINC00239-201ENST00000556973 A0A0G2JMM0 328 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 GOLGA8QA0A0J9YX86 632 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 A0A1B0GUH1 482 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 A0A1W2PPB8 328 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 A0A1W2PRS3 328 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 GOLGA8OA6NCC3 632 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 KIR3DP1A8MWS1 328 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 GOLGA8NF8WBI6 632 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 G3V3Y1 287 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 TSPAN2O60636 221 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 UGT2B11O75310 529 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 NME6O75414 186 aaPredicted RBP9.81□□□□□ -0.84
LINC00239-201ENST00000556973 REM1O75628 298 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 TGDSO95455 350 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 STSP08842 583 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 EPHA3P29320 983 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 CASP3P42574 277 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 CDK9P50750 372 aaKnown RBP9.81□□□□□ -0.84
LINC00239-201ENST00000556973 CORO7P57737 925 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 MRPS22P82650 360 aaKnown RBP9.81□□□□□ -0.84
LINC00239-201ENST00000556973 PRR5P85299 388 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 SRSF1Q07955 248 aaKnown RBP eCLIP9.81□□□□□ -0.84
LINC00239-201ENST00000556973 ZNF155Q12901 538 aaPredicted RBP9.81□□□□□ -0.84
LINC00239-201ENST00000556973 SNTA1Q13424 505 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 GAB1Q13480 694 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 EFR3AQ14156 821 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 PGS1Q32NB8 556 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 VPS26BQ4G0F5 336 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 CYP27C1Q4G0S4 372 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 CMPK2Q5EBM0 449 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 PRAMEF20Q5VT98 475 aa9.81□□□□□ -0.84
LINC00239-201ENST00000556973 SLC30A6Q6NXT4 461 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms